RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 NYAP2Q9P242 653 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 CLIP2Q9UDT6 1046 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 RAB23Q9ULC3 237 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 STX8Q9UNK0 236 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 AP4E1Q9UPM8 1137 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 ZDHHC9Q9Y397 364 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 SIT1Q9Y3P8 196 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 SLC12A7Q9Y666 1083 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 DDX49Q9Y6V7 483 aaKnown RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 NOTCH2Q04721 2471 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 FNDC1Q4ZHG4 1894 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 PCNX2A6NKB5 2137 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 SHROOM3Q8TF72 1996 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 EIF4E1BA6NMX2 242 aaKnown RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 SRRM3A6NNA2 597 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 LAMTOR5O43504 91 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 CYTH3O43739 400 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 CPNE3O75131 537 aaKnown RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 DGKIO75912 1065 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 TTLL1O95922 423 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 NDUFB10O96000 172 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 GH1P01241 217 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 HSP90AA1P07900 732 aaKnown RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 C1QTNF9P0C862 333 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 GOLGA8HP0CJ92 632 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 SNHG28P0DPA3 235 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 PDHBP11177 359 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 BUD31P41223 144 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 ASPAP45381 313 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 GRIA4P48058 902 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 RBM10P98175 930 aaKnown RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 CYP27A1Q02318 531 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 PCDH1Q08174 1060 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 ORC1Q13415 861 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 KCNC3Q14003 757 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 KIAA0753Q2KHM9 967 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 SPRED3Q2MJR0 410 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 CCDC178Q5BJE1 867 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 SPECC1Q5M775 1068 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 ATAT1Q5SQI0 421 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 XRRA1Q6P2D8 792 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 NSMFQ6X4W1 530 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 TMTC3Q6ZXV5 915 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 OTOP3Q7RTS5 596 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 CATIPQ7Z7H3 387 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 LURAP1LQ8IV03 231 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 ZBTB44Q8NCP5 570 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 CHURC1Q8WUH1 139 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 AFG1LQ8WV93 481 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 PHKBQ93100 1093 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 MKL1Q969V6 931 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 AIFM3Q96NN9 605 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 GPR20Q99678 358 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 LLPHQ9BRT6 129 aaKnown RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 APOL5Q9BWW9 433 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 DNAJC25Q9H1X3 360 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 CPVLQ9H3G5 476 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 TBC1D17Q9HA65 648 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 PARD6AQ9NPB6 346 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 GJB4Q9NTQ9 266 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 ZSCAN32Q9NX65 697 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 IGSF9Q9P2J2 1179 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 MAD2L2Q9UI95 211 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 DBR1Q9UK59 544 aaKnown RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 SYNPO2Q9UMS6 1093 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 SMC3Q9UQE7 1217 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 PCDHB12Q9Y5F1 795 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 MRPL42Q9Y6G3 142 aaKnown RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 COL4A3Q01955 1670 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 ITPR3Q14573 2671 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 NCANO14594 1321 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 FRMPD2Q68DX3 1309 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-206ENST00000441089 C2orf16Q68DN1 1984 aa5.42□□□□□ -1.54
PTPN4-206ENST00000441089 CREBBPQ92793 2442 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-206ENST00000441089 hCG_1642624A0A1W2PR95 340 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 HAS3O00219 553 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 GPR182O15218 404 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 EOMESO95936 686 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 F2P00734 622 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 DCNP07585 359 aaKnown RBP5.41□□□□□ -1.54
PTPN4-206ENST00000441089 CALM1P0DP23 149 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 CALM2P0DP24 149 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 CALM3P0DP25 149 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 IFNAR1P17181 557 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 SYT1P21579 422 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 ITPKAP23677 461 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 STAT2P52630 851 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 HP1BP3Q5SSJ5 553 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-206ENST00000441089 LAIR1Q6GTX8 287 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 TTBK2Q6IQ55 1244 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 KIAA1841Q6NSI8 718 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 LILRA6Q6PI73 481 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 SYNE3Q6ZMZ3 975 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 FAM160B2Q86V87 743 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 COPS5Q92905 334 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 ALKBH8Q96BT7 664 aaKnown RBP5.41□□□□□ -1.54
PTPN4-206ENST00000441089 DMRTB1Q96MA1 342 aa5.41□□□□□ -1.54
PTPN4-206ENST00000441089 MAP3K14Q99558 947 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms