RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 RGS9BPQ6ZS82 235 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 CATSPER3Q86XQ3 398 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 SRRM1Q8IYB3 904 aaKnown RBP12.65□□□□□ -0.39
LTBR-203ENST00000441074 CYP2W1Q8TAV3 490 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 UCMAQ8WVF2 138 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 FGD4Q96M96 766 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 FAM20AQ96MK3 541 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 SEPT11Q9NVA2 429 aaKnown RBP12.65□□□□□ -0.39
LTBR-203ENST00000441074 GGA3Q9NZ52 723 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 PHTF1Q9UMS5 762 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 IQCA1LA6NCM1 817 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 FAM47DPA6NHR8 397 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 EIF3DO15371 548 aaKnown RBP eCLIP12.64□□□□□ -0.39
LTBR-203ENST00000441074 HNRNPCL1O60812 293 aaKnown RBP12.64□□□□□ -0.39
LTBR-203ENST00000441074 COMTP21964 271 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 MARK3P27448 753 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 POLE2P56282 527 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 WDR4P57081 412 aaKnown RBP12.64□□□□□ -0.39
LTBR-203ENST00000441074 KIF22Q14807 665 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 KYNUQ16719 465 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 SESTD1Q86VW0 696 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 FBXO11Q86XK2 927 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 PALB2Q86YC2 1186 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 B4GALNT2Q8NHY0 566 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 CD101Q93033 1021 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
LTBR-203ENST00000441074 ADARB2Q9NS39 739 aaKnown RBP12.64□□□□□ -0.39
LTBR-203ENST00000441074 LNPEPQ9UIQ6 1025 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
LTBR-203ENST00000441074 TMEM110-MUSTN1A8MSY1 372 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 THAP12O43422 761 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 ASMTLO95671 621 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 STAT3P40763 770 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 GPC5P78333 572 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 ARHGAP4P98171 946 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 CAV1Q03135 178 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 EAPPQ56P03 285 aaPredicted RBP12.63□□□□□ -0.39
LTBR-203ENST00000441074 CRYGNQ8WXF5 182 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 DTNBP1Q96EV8 351 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 AGPAT1Q99943 283 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 MKNK1Q9BUB5 465 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 AMNQ9BXJ7 453 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 FAM192AQ9GZU8 254 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 OLFML3Q9NRN5 406 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 UBE4BO95155 1302 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 TBC1D12O60347 775 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 FOSP01100 380 aaPredicted RBP12.63□□□□□ -0.39
LTBR-203ENST00000441074 FTLP02792 175 aaPredicted RBP12.63□□□□□ -0.39
LTBR-203ENST00000441074 CETPP11597 493 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 FMO5P49326 533 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 KRT17Q04695 432 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 PABPC4Q13310 644 aaKnown RBP eCLIP12.63□□□□□ -0.39
LTBR-203ENST00000441074 ZRSR2Q15696 482 aaKnown RBP12.63□□□□□ -0.39
LTBR-203ENST00000441074 FOXB2Q5VYV0 432 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 ZNF449Q6P9G9 518 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 C4orf50Q6ZRC1 276 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 RNF207Q6ZRF8 634 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 SEPT14Q6ZU15 432 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 SYDE1Q6ZW31 735 aaPredicted RBP12.63□□□□□ -0.39
LTBR-203ENST00000441074 SNF8Q96H20 258 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 POP1Q99575 1024 aaKnown RBP12.63□□□□□ -0.39
LTBR-203ENST00000441074 CCDC77Q9BR77 488 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 TIPINQ9BVW5 301 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 SAR1AQ9NR31 198 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 PCMTD2Q9NV79 361 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 NINJ2Q9NZG7 142 aa12.63□□□□□ -0.39
LTBR-203ENST00000441074 MAGEA13PA6NCF6 341 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 PDLIM1O00151 329 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 CLIC2O15247 247 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 MTA2O94776 668 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 CFBP00751 764 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 ASNSP08243 561 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 SPATA31C1P0DKV0 1188 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 PSMC2P35998 433 aaKnown RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 MTMR2Q13614 643 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 RCN2Q14257 317 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 MESDQ14696 234 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 STAT4Q14765 748 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 CCDC6Q16204 474 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 KHDC1Q4VXA5 237 aaKnown RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 ZC3H12AQ5D1E8 599 aaKnown RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 SNX30Q5VWJ9 437 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 SDCCAG8Q86SQ7 713 aaPredicted RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 FAM186BQ8IYM0 893 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 PHC3Q8NDX5 983 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 RBM41Q96IZ5 413 aaKnown RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 AGBL1Q96MI9 1066 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 POLR3CQ9BUI4 534 aaPredicted RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 EURLQ9NYK6 297 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 ASIC3Q9UHC3 531 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 TBK1Q9UHD2 729 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 EDF1O60869 148 aaKnown RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 ATP9AO75110 1047 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 GCNT3O95395 438 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 CBX6O95503 412 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 MUTP22033 750 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 RFX1P22670 979 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 IVDP26440 423 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 SLC18A1P54219 525 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 CACNA2D1P54289 1103 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms