RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 STAT5BP51692 787 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 RABGGTBP53611 331 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 CDR2Q01850 454 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 CNTN2Q02246 1040 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 TFDP1Q14186 410 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 RAB30Q15771 203 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 ZACNQ401N2 412 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 IER5LQ5T953 404 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 IER5Q5VY09 327 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 MFSD14CQ5VZR4 134 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 TAS1R3Q7RTX0 852 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 GPIHBP1Q8IV16 184 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 UBL4BQ8N7F7 174 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 ARRDC4Q8NCT1 418 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 PLEKHO2Q8TD55 490 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 ATP8B4Q8TF62 1192 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 AENQ8WTP8 325 aaKnown RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 SCFD2Q8WU76 684 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 PSPC1Q8WXF1 523 aaKnown RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 CAVIN3Q969G5 261 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 CEP89Q96ST8 783 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 PLVAPQ9BX97 442 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 MRPL4Q9BYD3 311 aaKnown RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 IMPG2Q9BZV3 1241 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 SEPT11Q9NVA2 429 aaKnown RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 FAM86C1Q9NVL1 165 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 TMEM59LQ9UK28 342 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 NOC2LQ9Y3T9 749 aaKnown RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 PTPRZ1P23471 2315 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 KMT2BQ9UMN6 2715 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 MYO15AQ9UKN7 3530 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 GSTTP1A0A1W2PQM5 241 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 GOLGA8IPA6NC78 632 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 GOLGA8JA6NMD2 632 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 TMCO5BA8MYB1 307 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 K7ERI5 159 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 FOXN3O00409 490 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-209ENST00000440653 ALADP13716 330 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 GBP1P32455 592 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 ERVK-9P63128 1117 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 FAAP100Q0VG06 881 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 MAP2K5Q13163 448 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 CUL1Q13616 776 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 CAPSQ13938 189 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 TTLL4Q14679 1199 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 CELF3Q5SZQ8 465 aaKnown RBP9.79□□□□□ -0.84
HDAC6-209ENST00000440653 ZNF365Q70YC5 407 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 ERMP1Q7Z2K6 904 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 PLEKHH3Q7Z736 793 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 ZNF467Q7Z7K2 595 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-209ENST00000440653 NT5DC3Q86UY8 548 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 BRSK2Q8IWQ3 736 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 ABRAQ8N0Z2 381 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 GPRC5AQ8NFJ5 357 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 HELQQ8TDG4 1101 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 ASAP3Q8TDY4 903 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 WHAMMQ8TF30 809 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 CCDC127Q96BQ5 260 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 RUNDC3BQ96NL0 473 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 RPS6KC1Q96S38 1066 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 SH2D3AQ9BRG2 576 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 FAM213AQ9BRX8 229 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 MSTO1Q9BUK6 570 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 CERS4Q9HA82 394 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 VTA1Q9NP79 307 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 AVENQ9NQS1 362 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-209ENST00000440653 RBM12Q9NTZ6 932 aaKnown RBP9.79□□□□□ -0.84
HDAC6-209ENST00000440653 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.79□□□□□ -0.84
HDAC6-209ENST00000440653 RBAKQ9NYW8 714 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-209ENST00000440653 RBPJLQ9UBG7 517 aa9.79□□□□□ -0.84
HDAC6-209ENST00000440653 A0A0B4J269 797 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 IGKV6-21A0A0C4DH24 114 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 EPOPA6NHQ4 379 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 BUB1BO60566 1050 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-209ENST00000440653 TOM1L1O75674 476 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 HEXIM1O94992 359 aaKnown RBP9.78□□□□□ -0.84
HDAC6-209ENST00000440653 DLATP10515 647 aaKnown RBP9.78□□□□□ -0.84
HDAC6-209ENST00000440653 CYP11B1P15538 503 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 ATP4AP20648 1035 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 MAPK4P31152 587 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 CXCR5P32302 372 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 SSTR3P32745 418 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-209ENST00000440653 GPC5P78333 572 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 POU5F1Q01860 360 aaKnown RBP9.78□□□□□ -0.84
HDAC6-209ENST00000440653 SP2Q02086 613 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 DMTNQ08495 405 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 CCNI2Q6ZMN8 369 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-209ENST00000440653 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 WDR49Q8IV35 697 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 RPUSD2Q8IZ73 545 aaKnown RBP9.78□□□□□ -0.84
HDAC6-209ENST00000440653 MREGQ8N565 214 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 NPLOC4Q8TAT6 608 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 SLC35G2Q8TBE7 412 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 TAS1R2Q8TE23 839 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 FAXDC2Q96IV6 333 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 KREMEN1Q96MU8 473 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 RUFY1Q96T51 708 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 PSMB7Q99436 277 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms