RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 USP4Q13107 963 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 GIMAP8Q8ND71 665 aaPredicted RBP15.4■□□□□ 0.06
PCNX1-202ENST00000439984 PIGBQ92521 554 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 ADPGKQ9BRR6 497 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 ADGRL3Q9HAR2 1447 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 TSC22D2O75157 780 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 QPCTQ16769 361 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 ARHGEF16Q5VV41 709 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 NLRP10Q86W26 655 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 AMNQ9BXJ7 453 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 TMEM117Q9H0C3 514 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 ARHGEF37A1IGU5 675 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 TBC1D12O60347 775 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 SYNE4Q8N205 404 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 RFWD2Q8NHY2 731 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 ATG4AQ8WYN0 398 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 BTBD10Q9BSF8 475 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 XPO7Q9UIA9 1087 aaKnown RBP15.4■□□□□ 0.06
PCNX1-202ENST00000439984 EMSYQ7Z589 1322 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 C16orf96A6NNT2 1141 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 ENTPD5O75356 428 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 WEE2P0C1S8 567 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 VAMP7P51809 220 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 C21orf59P57076 290 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 DEFA1P59665 94 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 DEFA3P59666 94 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 INAQ16352 499 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 USPL1Q5W0Q7 1092 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 ZNF555Q8NEP9 628 aa15.4■□□□□ 0.06
PCNX1-202ENST00000439984 PTPAQ15257 358 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 TMC3Q7Z5M5 1100 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 SLC9A2Q9UBY0 812 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 CCNL1Q9UK58 526 aaPredicted RBP15.39■□□□□ 0.05
PCNX1-202ENST00000439984 SNAP23O00161 211 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 CHEK2O96017 543 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 FOSP01100 380 aaPredicted RBP15.39■□□□□ 0.05
PCNX1-202ENST00000439984 SERPINB2P05120 415 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 CAPN1P07384 714 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 HSPA13P48723 471 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 FASTKD1Q53R41 847 aaKnown RBP15.39■□□□□ 0.05
PCNX1-202ENST00000439984 ANGPTL8Q6UXH0 198 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 TTC8Q8TAM2 541 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 MTMR8Q96EF0 704 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 ZNF277Q9NRM2 450 aaPredicted RBP15.39■□□□□ 0.05
PCNX1-202ENST00000439984 NAALADL2Q58DX5 795 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 B3GNT6Q6ZMB0 384 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 CLVS1Q8IUQ0 354 aaPredicted RBP15.39■□□□□ 0.05
PCNX1-202ENST00000439984 CNDP1Q96KN2 507 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 ERGIC2Q96RQ1 377 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 HMOX2P30519 316 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 CLK1P49759 484 aaKnown RBP15.39■□□□□ 0.05
PCNX1-202ENST00000439984 RPS6KA3P51812 740 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 MCL1Q07820 350 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 EFHC1Q5JVL4 640 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 SGMS1Q86VZ5 419 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 C7orf31Q8N865 590 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 DIS3LQ8TF46 1054 aaKnown RBP15.39■□□□□ 0.05
PCNX1-202ENST00000439984 ARHGAP20Q9P2F6 1191 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 SUGT1Q9Y2Z0 365 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 PIK3R2O00459 728 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 FAM58BPP0C7Q3 252 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 OSBPP22059 807 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 KBTBD12Q3ZCT8 623 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 MAML3Q96JK9 1138 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 DMAP1Q9NPF5 467 aaPredicted RBP15.39■□□□□ 0.05
PCNX1-202ENST00000439984 GALNT8Q9NY28 637 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 SNX13Q9Y5W8 968 aa15.39■□□□□ 0.05
PCNX1-202ENST00000439984 ANTXR2P58335 489 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 SFSWAPQ12872 951 aaKnown RBP15.38■□□□□ 0.05
PCNX1-202ENST00000439984 TSTA3Q13630 321 aaPredicted RBP15.38■□□□□ 0.05
PCNX1-202ENST00000439984 TCHHL1Q5QJ38 904 aaPredicted RBP15.38■□□□□ 0.05
PCNX1-202ENST00000439984 KLHDC7AQ5VTJ3 777 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 CYFIP1Q7L576 1253 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 FRMD5Q7Z6J6 570 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 CREG2Q8IUH2 290 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 PARVBQ9HBI1 364 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 R3HDM2Q9Y2K5 976 aaKnown RBP15.38■□□□□ 0.05
PCNX1-202ENST00000439984 EME2A4GXA9 379 aaPredicted RBP15.38■□□□□ 0.05
PCNX1-202ENST00000439984 SERPINB5P36952 375 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 GTF2IP78347 998 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 DDIASQ8IXT1 998 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 RIBC1Q8N443 379 aaPredicted RBP15.38■□□□□ 0.05
PCNX1-202ENST00000439984 GDF3Q9NR23 364 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 ADRM1Q16186 407 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 TRAPPC3LQ5T215 181 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 CPA5Q8WXQ8 436 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 ATXN10Q9UBB4 475 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 MYO3BQ8WXR4 1341 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 DPPA5A6NC42 116 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 ZBTB8OSQ8IWT0 167 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 ARMCX1Q9P291 453 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 IP6K2Q9UHH9 426 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 HPSEQ9Y251 543 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 PTPRUQ92729 1446 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 CPDO75976 1380 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 SCNN1DP51172 638 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 NUP107P57740 925 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 HLFQ16534 295 aa15.38■□□□□ 0.05
PCNX1-202ENST00000439984 PPP1R2P3Q6NXS1 205 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms