RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ACTR2P61160 394 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 FSTL1Q12841 308 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 PLCB4Q15147 1175 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 NBPF12Q5TAG4 269 aaPredicted RBP14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 USP37Q86T82 979 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 OR5B17Q8NGF7 314 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 KDM4CQ9H3R0 1056 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 HOMER3Q9NSC5 361 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 AGO2Q9UKV8 859 aaKnown RBP14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 ASAP2O43150 1006 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 UBOX5O94941 541 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 VNN1O95497 513 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 GNA15P30679 374 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 POLGP54098 1239 aaPredicted RBP14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 SNRPFP62306 86 aaKnown RBP14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 SNCBQ16143 134 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 LACTB2Q53H82 288 aaPredicted RBP14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 RTKN2Q8IZC4 609 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 ATL2Q8NHH9 583 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 ATP6V0A1Q93050 837 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 TEPSINQ96N21 525 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 TIPINQ9BVW5 301 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 OSBPL8Q9BZF1 889 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 FHDC1Q9C0D6 1143 aaPredicted RBP14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 JPH1Q9HDC5 661 aaPredicted RBP14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 FDX1P10109 184 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 KCNA2P16389 499 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 CCND2P30279 289 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 RDXP35241 583 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 HMGCS2P54868 508 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 SP2Q02086 613 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 MAMLD1Q13495 774 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 P3H1Q32P28 736 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 TNFAIP8L3Q5GJ75 292 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 IZUMO3Q5VZ72 239 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 KIF2BQ8N4N8 673 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 ZNF668Q96K58 619 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 STMN4Q9H169 189 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 C10orf88Q9H8K7 445 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 FBXO40Q9UH90 709 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 NAALADL1Q9UQQ1 740 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 TTLL13PA6NNM8 815 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 CHUKO15111 745 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 SNX3O60493 162 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 SPAG7O75391 227 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 DGAT1O75907 488 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 PROSCO94903 275 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 ZNF568Q3ZCX4 644 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 ZACNQ401N2 412 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 SWT1Q5T5J6 900 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 FAM47EQ6ZV65 393 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 MON1BQ7L1V2 547 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 SPIRE2Q8WWL2 714 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 TMEM109Q9BVC6 243 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 ATP6V0A4Q9HBG4 840 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 RBAKQ9NYW8 714 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 NUB1Q9Y5A7 615 aa14.4□□□□□ -0.1
HERPUD1-204ENST00000439977 C4BPAP04003 597 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 EDN1P05305 212 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 PTK6Q13882 451 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 TXNRD3NBQ6F5E7 133 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 MFSD5Q6N075 450 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 SAMD3Q8N6K7 520 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 ASAP3Q8TDY4 903 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 TRAIPQ9BWF2 469 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 SAE1Q9UBE0 346 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 SLC9A2Q9UBY0 812 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 GOLGA8SH3BPF8 625 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 GOLGA8MH3BSY2 632 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 EXTL3O43909 919 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 PSAPP07602 524 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 KCNJ2P63252 427 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 ELF3P78545 371 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 STRN3Q13033 797 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 PRKG1Q13976 671 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 FASTKD3Q14CZ7 662 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 TMED2Q15363 201 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 FKBP1CQ5VVH2 108 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 CRELD2Q6UXH1 353 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 CCDC63Q8NA47 563 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 SLC17A8Q8NDX2 589 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 SERPINB12Q96P63 405 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 ROPN1BQ9BZX4 212 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 KIF9Q9HAQ2 790 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 ROPN1Q9HAT0 212 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 PNMA3Q9UL41 463 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 DNPEPQ9ULA0 475 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 TRIM33Q9UPN9 1127 aa14.39□□□□□ -0.11
HERPUD1-204ENST00000439977 POC1B-GALNT4F8VUJ3 575 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 ACO1P21399 889 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 CENPCQ03188 943 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 KLF1Q13351 362 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 XRCC4Q13426 336 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 CUL2Q13617 745 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 EMC2Q15006 297 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 C15orf39Q6ZRI6 1047 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 ZBTB33Q86T24 672 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 RHOT1Q8IXI2 618 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 RBBP8NLQ8NC74 664 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms