RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 SLC9C1Q4G0N8 1177 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 DNTTIP2Q5QJE6 756 aaKnown RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PRAMEF19Q5SWL8 479 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 KLHDC7AQ5VTJ3 777 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 SFMBT2Q5VUG0 894 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 CDCA2Q69YH5 1023 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 CYP4F22Q6NT55 531 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 SND1Q7KZF4 910 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 RRAGAQ7L523 313 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 TLK2Q86UE8 772 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZNF410Q86VK4 478 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 TMEM139Q8IV31 216 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 KSR1Q8IVT5 923 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 GPD1LQ8N335 351 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 CCDC42Q96M95 316 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 MSTO1Q9BUK6 570 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 LSM14BQ9BX40 385 aaKnown RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 CCDC113Q9H0I3 377 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 RNPEPQ9H4A4 650 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PCIF1Q9H4Z3 704 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 RRAGDQ9NQL2 400 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PRMT7Q9NVM4 692 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 AGO2Q9UKV8 859 aaKnown RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PLAGL2Q9UPG8 496 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PPP2R2CQ9Y2T4 447 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PAXBP1Q9Y5B6 917 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZSWIM8A7E2V4 1837 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRIP12Q14669 1992 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ADGRA3Q8IWK6 1321 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 A0A0B4J269 797 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 SMIM35A0A1B0GVV1 85 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 SSU72P8A0A1W2PR75 194 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 EIF3CLB5ME19 914 aaKnown RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 INO80B-WBP1J3KQ70 363 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 RNF225M0QZC1 329 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 C2CD2LO14523 706 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 OGTO15294 1046 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 CLDN3O15551 220 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 SEPT4O43236 478 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 WIPF1O43516 503 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 AKR1B10O60218 316 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 MSCO60682 206 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 AOC2O75106 756 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZC3H11AO75152 810 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 GFPT2O94808 682 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 NOL4O94818 638 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 NDUFA10O95299 355 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 F2P00734 622 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 PDGFAP04085 211 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 SERPING1P05155 500 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 PRKCBP05771 671 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 MYL3P08590 195 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZNF286BP0CG31 522 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 RARBP10826 455 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 UCHL3P15374 230 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 FERP16591 822 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 SLC9A1P19634 815 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 MAPK1P28482 360 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ADSSP30520 456 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 STAT1P42224 750 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 MAP2K3P46734 347 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 FLT3LGP49771 235 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 KLK7P49862 253 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 MXI1P50539 228 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 PRMT2P55345 433 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 GJA9P57773 515 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 POLR2FP61218 127 aaKnown RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 IGBP1P78318 339 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 NKX3-2P78367 333 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 CYP24A1Q07973 514 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 GOLGA8FQ08AF8 430 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 GOLGA8DPQ0D2H9 430 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 PRPF4BQ13523 1007 aaKnown RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 PSMD6Q15008 389 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 GRIK4Q16099 956 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ASIC2Q16515 512 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 CCL14Q16627 93 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 FAM187BQ17R55 369 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIAA0753Q2KHM9 967 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 C10orf76Q5T2E6 689 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 TMEM63BQ5T3F8 832 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 GJC2Q5T442 439 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 E4F1Q66K89 784 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 KRT39Q6A163 491 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ALKBH2Q6NS38 261 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 SLC39A4Q6P5W5 647 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 PDXDC1Q6P996 788 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRIM65Q6PJ69 517 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 WDR59Q6PJI9 974 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 MTHFD1LQ6UB35 978 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZNF662Q6ZS27 426 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 TSHZ1Q6ZSZ6 1077 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ENOSF1Q7L5Y1 443 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 SRGAP1Q7Z6B7 1085 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 VPS36Q86VN1 386 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 RHPN2Q8IUC4 686 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 NME8Q8N427 588 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 LRRC71Q8N4P6 559 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 LINC01465Q8N7H1 131 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms