RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 DBNDD1Q9H9R9 158 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 FBXO6Q9NRD1 293 aaPredicted RBP9.58□□□□□ -0.88
COPB1-202ENST00000439561 SEL1LQ9UBV2 794 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 KIF13AQ9H1H9 1805 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 I3L4J1 428 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 IPO5O00410 1097 aaKnown RBP9.58□□□□□ -0.88
COPB1-202ENST00000439561 TBX3O15119 743 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 PECAM1P16284 738 aaPredicted RBP9.58□□□□□ -0.88
COPB1-202ENST00000439561 RFX1P22670 979 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 PHBP35232 272 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 SLC1A5Q15758 541 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 SMAD1Q15797 465 aaKnown RBP9.58□□□□□ -0.88
COPB1-202ENST00000439561 ATP13A4Q4VNC1 1196 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 LRRC23Q53EV4 343 aaPredicted RBP9.58□□□□□ -0.88
COPB1-202ENST00000439561 FAM182AQ5T1J6 154 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 KRT39Q6A163 491 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 DSTYKQ6XUX3 929 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 CEP128Q6ZU80 1094 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 C1orf186Q6ZWK4 172 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 RHOT1Q8IXI2 618 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 JDP2Q8WYK2 163 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 CCDC124Q96CT7 223 aaKnown RBP9.58□□□□□ -0.88
COPB1-202ENST00000439561 POLR3CQ9BUI4 534 aaPredicted RBP9.58□□□□□ -0.88
COPB1-202ENST00000439561 LRMDAQ9H2I8 198 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 LRRC19Q9H756 370 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 SYNCQ9H7C4 482 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 KIAA1586Q9HCI6 787 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 AAASQ9NRG9 546 aa9.58□□□□□ -0.88
COPB1-202ENST00000439561 ATF5Q9Y2D1 282 aaPredicted RBP9.58□□□□□ -0.88
COPB1-202ENST00000439561 INHBAP08476 426 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 ARP10275 920 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 SERPINB3P29508 390 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 SSTR1P30872 391 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 FMO1Q01740 532 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 NR1H3Q13133 447 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 SNRNP35Q16560 246 aaKnown RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 C1orf146Q5VVC0 180 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 PTF1AQ7RTS3 328 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 OTOAQ7RTW8 1153 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 LRRC6Q86X45 466 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 ZNF75CPQ92670 426 aaPredicted RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 CRAMP1Q96RY5 1269 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 FAM213AQ9BRX8 229 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 TSSK1BQ9BXA7 367 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 ZWILCHQ9H900 591 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 SMG5Q9UPR3 1016 aaKnown RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 GLI3P10071 1580 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 DDX60Q8IY21 1712 aaKnown RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 TAF1P21675 1872 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 ZNF142P52746 1687 aaPredicted RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 B2RBV5 119 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 LPXNO60711 386 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 SREBF1P36956 1147 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 PSMC4P43686 418 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 LAMB3Q13751 1172 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 ACAD10Q6JQN1 1059 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 TMEM270Q6UE05 265 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 FAM196AQ6ZSG2 479 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 FBXL13Q8NEE6 735 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 UTP4Q969X6 686 aaKnown RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 THTPAQ9BU02 230 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 MOV10L1Q9BXT6 1211 aaKnown RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 WDR11Q9BZH6 1224 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 FHDC1Q9C0D6 1143 aaPredicted RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 GPR88Q9GZN0 384 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 TRPM3Q9HCF6 1732 aaPredicted RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 USP20Q9Y2K6 914 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 RPS6KA4O75676 772 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 GZMAP12544 262 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 EPHB1P54762 984 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 CUL3Q13618 768 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 PTK6Q13882 451 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 BMT2Q1RMZ1 405 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 CGB2Q6NT52 195 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 CDC42EP5Q6NZY7 148 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 C3orf62Q6ZUJ4 267 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 DCAF4Q8WV16 495 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 FAM111AQ96PZ2 611 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 P2RX7Q99572 595 aaKnown RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 TCHPQ9BT92 498 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 TMEM121Q9BTD3 319 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 SLC13A1Q9BZW2 595 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 UNC45AQ9H3U1 944 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 TUFT1Q9NNX1 390 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 PSMC3IPQ9P2W1 217 aaPredicted RBP9.57□□□□□ -0.88
COPB1-202ENST00000439561 POLLQ9UGP5 575 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 KCNG1Q9UIX4 513 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 EXOC7Q9UPT5 735 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 STARD13Q9Y3M8 1113 aa9.57□□□□□ -0.88
COPB1-202ENST00000439561 NUP98P52948 1817 aa9.56□□□□□ -0.88
COPB1-202ENST00000439561 ZWINTO95229 277 aa9.56□□□□□ -0.88
COPB1-202ENST00000439561 ZBTB48P10074 688 aaPredicted RBP9.56□□□□□ -0.88
COPB1-202ENST00000439561 ALADP13716 330 aa9.56□□□□□ -0.88
COPB1-202ENST00000439561 ETS2P15036 469 aa9.56□□□□□ -0.88
COPB1-202ENST00000439561 SP100P23497 879 aaPredicted RBP9.56□□□□□ -0.88
COPB1-202ENST00000439561 SERPINB6P35237 376 aa9.56□□□□□ -0.88
COPB1-202ENST00000439561 STAT2P52630 851 aa9.56□□□□□ -0.88
COPB1-202ENST00000439561 TMPRSS15P98073 1019 aa9.56□□□□□ -0.88
COPB1-202ENST00000439561 LMNB2Q03252 620 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms