RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 SLC39A14Q15043 492 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 ZC2HC1CQ53FD0 456 aaPredicted RBP22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 SIX5Q8N196 739 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 KRI1Q8N9T8 703 aaKnown RBP22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 APPL2Q8NEU8 664 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 ITFG1Q8TB96 612 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 DDX12PQ92771 950 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 FGF13Q92913 245 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 USP28Q96RU2 1077 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 NOTCH4Q99466 2003 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 MSTO1Q9BUK6 570 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 RPF1Q9H9Y2 349 aaKnown RBP22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 FOXD4L1Q9NU39 408 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 CPSF3Q9UKF6 684 aaKnown RBP22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 KCNH3Q9ULD8 1083 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 UBQLN1Q9UMX0 589 aaKnown RBP22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 PCDHB8Q9UN66 801 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 NUMBLQ9Y6R0 609 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 ANKRD63C9JTQ0 380 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 M0QZQ0 153 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 CFHP08603 1231 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 AARSP49588 968 aaKnown RBP eCLIP22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 CTXN3Q4LDR2 81 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 PABPC1LQ4VXU2 614 aaKnown RBP22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 RRAGBQ5VZM2 374 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 TPGS2Q68CL5 300 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 DYMQ7RTS9 669 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 TCEAL8Q8IYN2 117 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 FLCNQ8NFG4 579 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 ZSCAN16Q9H4T2 348 aaPredicted RBP22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 STYXL1Q9Y6J8 313 aa22.09■■□□□ 1.13
NCKIPSD-206ENST00000439518 KRBA1A5PL33 1030 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 MYMKA6NI61 221 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 STX6O43752 255 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 SEC24AO95486 1093 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 AOC1P19801 751 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 ELF1P32519 619 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 TXLNAP40222 546 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 ARPP19P56211 112 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 SPATA1Q5VX52 437 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 ZNF280DQ6N043 979 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 PARM1Q6UWI2 310 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 ZNF720Q7Z2F6 126 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 SFR1Q86XK3 245 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 ST13P5Q8NFI4 369 aaPredicted RBP22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 FGF14Q92915 247 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 DNAJC19Q96DA6 116 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 RPP25Q9BUL9 199 aaKnown RBP22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 STRA6Q9BX79 667 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 IRF2BPLQ9H1B7 796 aa22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 AVENQ9NQS1 362 aaPredicted RBP22.08■■□□□ 1.13
NCKIPSD-206ENST00000439518 ZFHX2Q9C0A1 2572 aaPredicted RBP22.08■■□□□ 1.12
NCKIPSD-206ENST00000439518 TISP43B9A030 160 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 PRRG1O14668 218 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 XPOTO43592 962 aaKnown RBP22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 PI15O43692 258 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 PPP1R37O75864 691 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 OAZ2O95190 189 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 GUCY2FP51841 1108 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 SV2BQ7L1I2 683 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 CD302Q8IX05 232 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 NPAS3Q8IXF0 933 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 HVCN1Q96D96 273 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 SLC2A4RGQ9NR83 387 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 SEL1LQ9UBV2 794 aa22.07■■□□□ 1.12
NCKIPSD-206ENST00000439518 RHOP08100 348 aa22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 NASPP49321 788 aaPredicted RBP22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 JADE1Q6IE81 842 aa22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 SLFN12LQ6IEE8 588 aa22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 CCDC73Q6ZRK6 1079 aa22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 GPR152Q8TDT2 470 aa22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 IKZF4Q9H2S9 585 aa22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 CYP4F11Q9HBI6 524 aa22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 AFF4Q9UHB7 1163 aaKnown RBP22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 MAFFQ9ULX9 164 aa22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 INSL5Q9Y5Q6 135 aa22.06■■□□□ 1.12
NCKIPSD-206ENST00000439518 A0A087X0B3 334 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 H0Y858 1186 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 PPEF2O14830 753 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 LRG1P02750 347 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 GAP43P17677 238 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 PTPN2P17706 415 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 ACOT2P49753 483 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 YWHAHQ04917 246 aaPredicted RBP22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 SLC5A9Q2M3M2 681 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 ADALQ6DHV7 355 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 MTSS1LQ765P7 747 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 BEST2Q8NFU1 509 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 SNX21Q969T3 373 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 FAM212AQ96EL1 285 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 OXCT2Q9BYC2 517 aaPredicted RBP22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 DERAQ9Y315 318 aa22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 MRPS23Q9Y3D9 190 aaKnown RBP22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 TIMM13Q9Y5L4 95 aaPredicted RBP22.05■■□□□ 1.12
NCKIPSD-206ENST00000439518 NFICP08651 508 aa22.04■■□□□ 1.12
NCKIPSD-206ENST00000439518 ADSSP30520 456 aa22.04■■□□□ 1.12
NCKIPSD-206ENST00000439518 POU5F1Q01860 360 aaKnown RBP22.04■■□□□ 1.12
NCKIPSD-206ENST00000439518 ADCY1Q08828 1119 aa22.04■■□□□ 1.12
NCKIPSD-206ENST00000439518 LINC00301Q8NCQ3 95 aa22.04■■□□□ 1.12
NCKIPSD-206ENST00000439518 ING5Q8WYH8 240 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms