RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 DTNBO60941 627 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 PEX14O75381 377 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 NCR1O76036 304 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 ENDOD1O94919 500 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 SPATA31D3P0C874 917 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 RAP2AP10114 183 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 NR4A1P22736 598 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 FLT3LGP49771 235 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 NEK3P51956 506 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 FAM189BP81408 668 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 ATP8B2P98198 1209 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 CDC42EP1Q00587 391 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 SNAPC2Q13487 334 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 IL31Q6EBC2 164 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 LAIR1Q6GTX8 287 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 SPATA31D4Q6ZUB0 917 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 CCDC149Q6ZUS6 474 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 CHST15Q7LFX5 561 aaPredicted RBP4.46□□□□□ -1.7
VPS41-207ENST00000439468 RSPH3Q86UC2 560 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 CELF5Q8N6W0 485 aaKnown RBP4.46□□□□□ -1.7
VPS41-207ENST00000439468 DCBLD1Q8N8Z6 715 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 KLHDC4Q8TBB5 520 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 IFI44Q8TCB0 444 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 LENG9Q96B70 501 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 RGMAQ96B86 450 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 SARGQ9BW04 601 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 APOL5Q9BWW9 433 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 SLC46A2Q9BY10 475 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 BHMT2Q9H2M3 363 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 BCO1Q9HAY6 547 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 C11orf21Q9P2W6 132 aa4.46□□□□□ -1.7
VPS41-207ENST00000439468 ATRNL1Q5VV63 1379 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 RNASET2O00584 256 aaKnown RBP4.45□□□□□ -1.7
VPS41-207ENST00000439468 NDUFA10O95299 355 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 MYL1P05976 194 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 SBK3P0C264 359 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 DDCP20711 480 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 GUCY1A2P33402 732 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 NOGQ13253 232 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 BMT2Q1RMZ1 405 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 GJC2Q5T442 439 aaPredicted RBP4.45□□□□□ -1.7
VPS41-207ENST00000439468 ATXN7L2Q5T6C5 722 aaPredicted RBP4.45□□□□□ -1.7
VPS41-207ENST00000439468 GPRIN1Q7Z2K8 1008 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 TTC7BQ86TV6 843 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 PLXDC1Q8IUK5 500 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 VRK3Q8IV63 474 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 ULK2Q8IYT8 1036 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 KIAA0319LQ8IZA0 1049 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 SLC35B2Q8TB61 432 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 PARD3BQ8TEW8 1205 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 AKIP1Q9NQ31 210 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 MAN1C1Q9NR34 630 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 ANKFY1Q9P2R3 1169 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.45□□□□□ -1.7
VPS41-207ENST00000439468 ABCF2Q9UG63 623 aa4.45□□□□□ -1.7
VPS41-207ENST00000439468 USP15Q9Y4E8 981 aaPredicted RBP4.45□□□□□ -1.7
VPS41-207ENST00000439468 CFAP20Q9Y6A4 193 aaKnown RBP4.45□□□□□ -1.7
VPS41-207ENST00000439468 CXorf49A8MYA2 514 aaPredicted RBP4.44□□□□□ -1.7
VPS41-207ENST00000439468 H3BUI4 141 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 LPXNO60711 386 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 GPR32O75388 356 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 MYL3P08590 195 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 SNRPA1P09661 255 aaKnown RBP4.44□□□□□ -1.7
VPS41-207ENST00000439468 TRIM27P14373 513 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 RHCEP18577 417 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 MALP21145 153 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 ALDH1A3P47895 512 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 CHN2P52757 468 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 HK3P52790 923 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 INHBEP58166 350 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 CLRN1P58418 232 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 NKX6-1P78426 367 aaPredicted RBP4.44□□□□□ -1.7
VPS41-207ENST00000439468 MXRA7P84157 204 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 RHDQ02161 417 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 TLE1Q04724 770 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 MTM1Q13496 603 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 CNN3Q15417 329 aaKnown RBP4.44□□□□□ -1.7
VPS41-207ENST00000439468 KIAA0753Q2KHM9 967 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 AFMIDQ63HM1 303 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 PPP4R3AQ6IN85 833 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 DRICH1Q6PGQ1 229 aaPredicted RBP4.44□□□□□ -1.7
VPS41-207ENST00000439468 HEATR3Q7Z4Q2 680 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 SYT12Q8IV01 421 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 C3orf20Q8ND61 904 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 PJA1Q8NG27 643 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 C1orf43Q9BWL3 253 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 TEX101Q9BY14 249 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 MANSC1Q9H8J5 431 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 CYP4F11Q9HBI6 524 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 DDX21Q9NR30 783 aaKnown RBP eCLIP4.44□□□□□ -1.7
VPS41-207ENST00000439468 LANCL2Q9NS86 450 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 LMBRD1Q9NUN5 540 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 MOCS1Q9NZB8 636 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 SLC23A1Q9UHI7 598 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 L1RE1Q9UN81 338 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 STXBP5LQ9Y2K9 1186 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 PCDHA1Q9Y5I3 950 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 DMRT1Q9Y5R6 373 aa4.44□□□□□ -1.7
VPS41-207ENST00000439468 UNC119BA6NIH7 251 aa4.43□□□□□ -1.7
VPS41-207ENST00000439468 DIRC3C9JPN6 131 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms