RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 KCNE1P15382 129 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 AKAP5P24588 427 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 ATICP31939 592 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 EIF4A3P38919 411 aaKnown RBP13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 RAB27AP51159 221 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 MYL6P60660 151 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 TOGARAM2Q6ZUX3 1019 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 LRRC8DQ7L1W4 858 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 C1orf127Q8N9H9 656 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 MAFAQ8NHW3 353 aaPredicted RBP13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 SHC3Q92529 594 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 KAT5Q92993 513 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 TOX2Q96NM4 488 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 EIF3CQ99613 913 aaKnown RBP13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 APOL6Q9BWW8 343 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 SPTLC3Q9NUV7 552 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 PARP2Q9UGN5 583 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 ADGRG1Q9Y653 693 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 XPOTO43592 962 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 GFPT2O94808 682 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 PLEKP08567 350 aaPredicted RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 CCDC175P0C221 793 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 SKIP12755 728 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 ITGA4P13612 1032 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 TBXAS1P24557 533 aaPredicted RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 ANXA13P27216 316 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 NOP14P78316 857 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 RBP5P82980 135 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 ARID5AQ03989 594 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 MBTPS1Q14703 1052 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 ASTE1Q2TB18 679 aaPredicted RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 TDRD12Q587J7 1177 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 FAM109BQ6ICB4 259 aaPredicted RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 FAM71AQ8IYT1 594 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 C17orf53Q8N3J3 647 aaPredicted RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 BEST2Q8NFU1 509 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 CXorf38Q8TB03 319 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 ZMAT2Q96NC0 199 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 CDX2Q99626 313 aaPredicted RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 XYLT2Q9H1B5 865 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 HAUS4Q9H6D7 363 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 VRTNQ9H8Y1 702 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 APOBEC3GQ9HC16 384 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 DPP3Q9NY33 737 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 SIX4Q9UIU6 781 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 UBQLN1Q9UMX0 589 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 PPP2R2CQ9Y2T4 447 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 GIT1Q9Y2X7 761 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 NUB1Q9Y5A7 615 aa13.29□□□□□ -0.28
HLA-DOB-206ENST00000438763 ANK1P16157 1881 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 A0A0U1RQF3 1178 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 SMIM28A0A1B0GU29 152 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 GOLGA6L9A6NEM1 432 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 DCDC2CA8MYV0 355 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 AKR1B10O60218 316 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 MGEA5O60502 916 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 PQBP1O60828 265 aaKnown RBP13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 IPO7O95373 1038 aaKnown RBP13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 LCA5LO95447 670 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 STAU1O95793 577 aaKnown RBP13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 ITGB3P05106 788 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 ATN1P54259 1190 aaPredicted RBP13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 KRT83P78385 493 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 CUL2Q13617 745 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 SPOPLQ6IQ16 392 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 REXO1L1PQ8IX06 675 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 PGBD4Q96DM1 585 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 ADAM2Q99965 735 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 RGS18Q9NS28 235 aa13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 TRMT1Q9NXH9 659 aaKnown RBP13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 R3HCC1Q9Y3T6 440 aaKnown RBP13.28□□□□□ -0.28
HLA-DOB-206ENST00000438763 OFD1O75665 1012 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 PARNO95453 639 aaKnown RBP13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 KRT19P08727 400 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 PNMA6AP0CW24 399 aaPredicted RBP13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 CYP3A5P20815 502 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 KIF11P52732 1056 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 TLE2Q04725 743 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 PTK2Q05397 1052 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 FAAP100Q0VG06 881 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 SPA17Q15506 151 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 ZNF699Q32M78 642 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 ZNF571Q7Z3V5 609 aaPredicted RBP13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 ELMO3Q96BJ8 720 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 PPP1R13BQ96KQ4 1090 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 DESI2Q9BSY9 194 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 FTHL17Q9BXU8 183 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 IFIH1Q9BYX4 1025 aaKnown RBP13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 NIF3L1Q9GZT8 377 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 CXCL16Q9H2A7 254 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 UBN1Q9NPG3 1134 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 KLK14Q9P0G3 267 aa13.27□□□□□ -0.29
HLA-DOB-206ENST00000438763 AGAP1Q9UPQ3 857 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms