RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 IGSF9BQ9UPX0 1349 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 CYP3A7-CYP3A51PA0A087WV96 503 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 CCDC22O60826 627 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 NOL3O60936 208 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 CYP3A7P24462 503 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 GPC3P51654 580 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 EIF3EP60228 445 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 NOP14P78316 857 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 ROR1Q01973 937 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 BAATQ14032 418 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF568Q3ZCX4 644 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 ERMARDQ5T6L9 678 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 NUDCD3Q8IVD9 361 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 TEX2Q8IWB9 1127 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 C1orf131Q8NDD1 294 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 LNX1Q8TBB1 728 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF384Q8TF68 577 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 LPAR1Q92633 364 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 GJD4Q96KN9 370 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 MAGEB18Q96M61 343 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 MCEEQ96PE7 176 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 TSSK1BQ9BXA7 367 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 MRPL4Q9BYD3 311 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 FGFBP2Q9BYJ0 223 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 SETD1AO15047 1707 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 PSTPIP1O43586 416 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ANP32DO95626 131 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ATP6V1G2O95670 118 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 NR3C2P08235 984 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 TAL1P17542 331 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 NCF2P19878 526 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 DRG2P55039 364 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 CDH6P55285 790 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 BCAR1P56945 870 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ZCWPW2Q504Y3 356 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 C2CD6Q53TS8 623 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 LVRNQ6Q4G3 990 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 GADL1Q6ZQY3 521 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 C3orf62Q6ZUJ4 267 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 C1orf186Q6ZWK4 172 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ARHGEF19Q8IW93 802 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 DNAAF3Q8N9W5 541 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 MIPOL1Q8TD10 442 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 SHISA4Q96DD7 197 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 FAM167AQ96KS9 214 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 SLC13A1Q9BZW2 595 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 C17orf75Q9HAS0 396 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 SLC38A10Q9HBR0 1119 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 APOBEC2Q9Y235 224 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 AKT3Q9Y243 479 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 PCDHA3Q9Y5H8 950 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 CASZ1Q86V15 1759 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 MEIS2O14770 477 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 KITP10721 976 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 CIITAP33076 1130 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 KCTD2Q14681 263 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 TKFCQ3LXA3 575 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ARSHQ5FYA8 562 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 C1orf146Q5VVC0 180 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 DUPD1Q68J44 220 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 SV2AQ7L0J3 742 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 TMC2Q8TDI7 906 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ATXN2LQ8WWM7 1075 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 TMEM143Q96AN5 459 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 MOV10L1Q9BXT6 1211 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 RANBP17Q9H2T7 1088 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 TAS2R14Q9NYV8 317 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 PHTF1Q9UMS5 762 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ROBO3Q96MS0 1386 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 RASSF10A6NK89 507 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ZBTB39O15060 712 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 EXTL3O43909 919 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ZC3H11AO75152 810 aaKnown RBP eCLIP7.05□□□□□ -1.285e-6■□□□□ 9.7
CSDE1-205ENST00000438362 PROSCO94903 275 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 PGM1P36871 562 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 PPP2R5CQ13362 524 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 CRYMQ14894 314 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 CCNG2Q16589 344 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 FAM102AQ5T9C2 384 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF572Q7Z3I7 529 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 DHX38Q92620 1227 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 AKT1S1Q96B36 256 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 POP1Q99575 1024 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 KLF6Q99612 283 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 NUF2Q9BZD4 464 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 WWP1Q9H0M0 922 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF70Q9UC06 446 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 NAALADL1Q9UQQ1 740 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 NCANO14594 1321 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 BCL9LQ86UU0 1499 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 M0QYV0 167 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 CST8O60676 142 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 DNAJC8O75937 253 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 SHBGP04278 402 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 NUDT17P0C025 328 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 MAPTP10636 758 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 GTF2H1P32780 548 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 NPTX2P47972 431 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 RARRES1P49788 294 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 RPS6P62753 249 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms