RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 CUTAO60888 179 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 KCNE1P15382 129 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 KLRC2P26717 231 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 CASP1P29466 404 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 TXLNAP40222 546 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 BRCC3P46736 316 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 GUCY2FP51841 1108 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 CBX2Q14781 532 aaPredicted RBP9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 ENOX2Q16206 610 aaKnown RBP9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 UPP1Q16831 310 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 USP41Q3LFD5 358 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 SWT1Q5T5J6 900 aaKnown RBP9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 RSPO2Q6UXX9 243 aaPredicted RBP9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 CCDC73Q6ZRK6 1079 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 SV2BQ7L1I2 683 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 ZNF720Q7Z2F6 126 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 GLYCTKQ8IVS8 523 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 FAM174AQ8TBP5 190 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 RIN2Q8WYP3 895 aaPredicted RBP9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 BICD1Q96G01 975 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 FBXL18Q96ME1 805 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 ACAP3Q96P50 834 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 ST6GALNAC4Q9H4F1 302 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 POMKQ9H5K3 350 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 TUBGCP4Q9UGJ1 667 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 SF3B1O75533 1304 aaKnown RBP eCLIP9.31□□□□□ -0.928e-6■■■■■ 107
HERPUD2-206ENST00000438224 H0YCG3 227 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 PPEF2O14830 753 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 NR1I2O75469 434 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 TADA2AO75478 443 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 ADRB2P07550 413 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 CLTAP09496 248 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 SPATA31D3P0C874 917 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 HOXB8P17481 243 aaPredicted RBP9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 FGFR3P22607 806 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 SP100P23497 879 aaPredicted RBP9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 TKTP29401 623 aaKnown RBP9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 ADSSP30520 456 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 LIG4P49917 911 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 YARSP54577 528 aaKnown RBP9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 EMP3P54852 163 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 WNT7BP56706 349 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 ZBTB6Q15916 424 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 SWI5Q1ZZU3 235 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 FAM171A1Q5VUB5 890 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 RESP18Q5W5W9 173 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 LILRA6Q6PI73 481 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 CRELD2Q6UXH1 353 aaPredicted RBP9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 TMC5Q6UXY8 1006 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 SPATA31D4Q6ZUB0 917 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 APBB1IPQ7Z5R6 666 aaPredicted RBP9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 RETREG3Q86VR2 466 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 LNX1Q8TBB1 728 aaPredicted RBP9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 PIK3R5Q8WYR1 880 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 HPS3Q969F9 1004 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 DHX58Q96C10 678 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 CLSTN3Q9BQT9 956 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 PHF7Q9BWX1 381 aaPredicted RBP9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 MAN1C1Q9NR34 630 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 TOPORSQ9NS56 1045 aaPredicted RBP9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 KBTBD4Q9NVX7 518 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 KCNG1Q9UIX4 513 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 RCOR1Q9UKL0 485 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 LHX6Q9UPM6 363 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 FAM50BQ9Y247 325 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 STYXL1Q9Y6J8 313 aa9.31□□□□□ -0.92
HERPUD2-206ENST00000438224 KMT2EQ8IZD2 1858 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 FAM86C2PA6NEL3 165 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 LACTBL1A8MY62 500 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 PI4K2BG5E9Z4 385 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 PODXLO00592 558 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 OGTO15294 1046 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 RFPL2O75678 378 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 B3GAT3O94766 335 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 GLUD1P00367 558 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 ADH1AP07327 375 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 SRGAP2BP0DMP2 458 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 IDEP14735 1019 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 GAP43P17677 238 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 HOXD13P35453 343 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 MATR3P43243 847 aaKnown RBP eCLIP9.3□□□□□ -0.924e-6■■■□□ 19.1
HERPUD2-206ENST00000438224 ME1P48163 572 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 ACOT2P49753 483 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 BMS1Q14692 1282 aaKnown RBP9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 PSMD5Q16401 504 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 DESI1Q6ICB0 168 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 KIAA1841Q6NSI8 718 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 DCLRE1AQ6PJP8 1040 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 CEP57Q86XR8 500 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 PALB2Q86YC2 1186 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 ANKMY2Q8IV38 441 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 GPR65Q8IYL9 337 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 GRAMD1CQ8IYS0 662 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 KCNG4Q8TDN1 519 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 LEO1Q8WVC0 666 aaPredicted RBP9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 ZNF707Q96C28 371 aaPredicted RBP9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 FAM84AQ96KN4 292 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 RPGRIP1Q96KN7 1286 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 TTPALQ9BTX7 342 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms