RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 SLC9A9Q8IVB4 645 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 RDH13Q8NBN7 331 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 APPL2Q8NEU8 664 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 VN1R2Q8NFZ6 395 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 SPATA20Q8TB22 786 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 LNX1Q8TBB1 728 aaPredicted RBP17.72■□□□□ 0.43
CTSD-205ENST00000438213 SLC22A17Q8WUG5 538 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 TMEM174Q8WUU8 243 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 SUSD3Q96L08 255 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 GBP4Q96PP9 640 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 KCTD10Q9H3F6 313 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 PDE11AQ9HCR9 933 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 DZANK1Q9NVP4 752 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 BARX2Q9UMQ3 279 aaPredicted RBP17.72■□□□□ 0.43
CTSD-205ENST00000438213 R3HCC1Q9Y3T6 440 aaKnown RBP17.72■□□□□ 0.43
CTSD-205ENST00000438213 ANO9A1A5B4 782 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 ARHGEF37A1IGU5 675 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 H7C4K7 107 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 I3L4J1 428 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 PIRO00625 290 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 BMP1P13497 986 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 KCNQ1P51787 676 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 CLCN4P51793 760 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 GUCY2FP51841 1108 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 PSMD5Q16401 504 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 ZNF658Q5TYW1 1059 aaPredicted RBP17.71■□□□□ 0.43
CTSD-205ENST00000438213 C9orf57Q5W0N0 161 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 PTCRAQ6ISU1 281 aaPredicted RBP17.71■□□□□ 0.43
CTSD-205ENST00000438213 ANKRD54Q6NXT1 300 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 PRSS55Q6UWB4 352 aaPredicted RBP17.71■□□□□ 0.43
CTSD-205ENST00000438213 DSTYKQ6XUX3 929 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.71■□□□□ 0.43
CTSD-205ENST00000438213 ANKRD36BP1Q96IX9 119 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 MSLNLQ96KJ4 702 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 FNBP1Q96RU3 617 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 MAPK8IP1Q9UQF2 711 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 TRAF3IP3Q9Y228 551 aa17.71■□□□□ 0.43
CTSD-205ENST00000438213 ATG2AQ2TAZ0 1938 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 GRXCR2A6NFK2 248 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 SPDYE4A6NLX3 237 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 GLUD1P00367 558 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 TMEM191BP0C7N4 346 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 RPL13P26373 211 aaKnown RBP17.7■□□□□ 0.42
CTSD-205ENST00000438213 TKTP29401 623 aaKnown RBP17.7■□□□□ 0.42
CTSD-205ENST00000438213 LILRA4P59901 499 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 RBM10P98175 930 aaKnown RBP17.7■□□□□ 0.42
CTSD-205ENST00000438213 CLUL1Q15846 466 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 DUOXA2Q1HG44 320 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 EFCAB13Q8IY85 973 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 HDAC7Q8WUI4 952 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 DMAC2Q9NW81 257 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 PCDHB8Q9UN66 801 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 FRMD4BQ9Y2L6 1034 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 BACE2Q9Y5Z0 518 aa17.7■□□□□ 0.42
CTSD-205ENST00000438213 EYSQ5T1H1 3165 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 M0QZQ0 153 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 TNNC2P02585 160 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 NR3C1P04150 777 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 EPCAMP16422 314 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 RPL17P18621 184 aaKnown RBP17.69■□□□□ 0.42
CTSD-205ENST00000438213 PNPLA4P41247 253 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 CYP24A1Q07973 514 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 SMAD4Q13485 552 aaKnown RBP17.69■□□□□ 0.42
CTSD-205ENST00000438213 PSMD6Q15008 389 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 USP37Q86T82 979 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 PALB2Q86YC2 1186 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 GLYCTKQ8IVS8 523 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 CSGALNACT2Q8N6G5 542 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 ERCC4Q92889 916 aaPredicted RBP17.69■□□□□ 0.42
CTSD-205ENST00000438213 MFSD14AQ96MC6 490 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 CLSTN3Q9BQT9 956 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 PLEKHA4Q9H4M7 779 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 INTS13Q9NVM9 706 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
CTSD-205ENST00000438213 GOLGA6L22H0YM25 854 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 MBTPS2O43462 519 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 DLATP10515 647 aaKnown RBP17.68■□□□□ 0.42
CTSD-205ENST00000438213 TNNI1P19237 187 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 OR1D2P34982 312 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 AARSP49588 968 aaKnown RBP eCLIP17.68■□□□□ 0.42
CTSD-205ENST00000438213 TAF6P49848 677 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 WNT7BP56706 349 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 RBP5P82980 135 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 ITIH3Q06033 890 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 STIM1Q13586 685 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 NFIL3Q16649 462 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 COBLL1Q53SF7 1204 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 VARS2Q5ST30 1063 aaKnown RBP17.68■□□□□ 0.42
CTSD-205ENST00000438213 CES5AQ6NT32 575 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 WDR49Q8IV35 697 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 SMRP1Q8NCR6 262 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 SENP8Q96LD8 212 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 ZNF560Q96MR9 790 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 OXCT2Q9BYC2 517 aaPredicted RBP17.68■□□□□ 0.42
CTSD-205ENST00000438213 MTRRQ9UBK8 725 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 AGAP1Q9UPQ3 857 aa17.68■□□□□ 0.42
CTSD-205ENST00000438213 PDCD11Q14690 1871 aaKnown RBP17.67■□□□□ 0.42
CTSD-205ENST00000438213 REV3LO60673 3130 aa17.67■□□□□ 0.42
CTSD-205ENST00000438213 PPEF2O14830 753 aa17.67■□□□□ 0.42
CTSD-205ENST00000438213 TGM5O43548 720 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms