RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 KCNG1Q9UIX4 513 aa20.52■□□□□ 0.88
FAM239A-202ENST00000438107 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.88
FAM239A-202ENST00000438107 KIAA1217Q5T5P2 1943 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 STBD1O95210 358 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 LMNB2Q03252 620 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 SPATA21Q7Z572 469 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 LARGE2Q8N3Y3 721 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 EXD1Q8NHP7 514 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 PDGFDQ9GZP0 370 aaPredicted RBP20.51■□□□□ 0.87
FAM239A-202ENST00000438107 GINM1Q9NU53 330 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 ARHGAP28Q9P2N2 729 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 PARP14Q460N5 1801 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 CALCAP01258 141 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 FDX1P10109 184 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 NCALDP61601 193 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 ZNF268Q14587 947 aaPredicted RBP20.51■□□□□ 0.87
FAM239A-202ENST00000438107 POTEAQ6S8J7 498 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 PPP1R21Q6ZMI0 780 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 CEP57Q86XR8 500 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 CCHCR1Q8TD31 782 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 ELMO3Q96BJ8 720 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 GRAMD1AQ96CP6 724 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 BICD1Q96G01 975 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 IFT74Q96LB3 600 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 OSBPL8Q9BZF1 889 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 EURLQ9NYK6 297 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 GABBR1Q9UBS5 961 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 PRKAG3Q9UGI9 489 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 SCINQ9Y6U3 715 aa20.51■□□□□ 0.87
FAM239A-202ENST00000438107 HLA-DRAP01903 254 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 C4BPAP04003 597 aaKnown RBP20.5■□□□□ 0.87
FAM239A-202ENST00000438107 CCND2P30279 289 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 BNIP1Q12981 228 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 MKRN4PQ13434 485 aaPredicted RBP20.5■□□□□ 0.87
FAM239A-202ENST00000438107 IZUMO3Q5VZ72 239 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 TAS1R3Q7RTX0 852 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 PHF13Q86YI8 300 aaPredicted RBP20.5■□□□□ 0.87
FAM239A-202ENST00000438107 ANKRD42Q8N9B4 389 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 GIMAP7Q8NHV1 300 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 KCNN1Q92952 543 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 NKIRAS1Q9NYS0 192 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 AGAP1Q9UPQ3 857 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 NAALADL1Q9UQQ1 740 aa20.5■□□□□ 0.87
FAM239A-202ENST00000438107 ZBTB12Q9Y330 459 aaPredicted RBP20.5■□□□□ 0.87
FAM239A-202ENST00000438107 CTDP1Q9Y5B0 961 aaPredicted RBP20.5■□□□□ 0.87
FAM239A-202ENST00000438107 ZNF862O60290 1169 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 ZBED4O75132 1171 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 NQO1P15559 274 aaKnown RBP20.49■□□□□ 0.87
FAM239A-202ENST00000438107 ACO1P21399 889 aaKnown RBP20.49■□□□□ 0.87
FAM239A-202ENST00000438107 KLRC2P26717 231 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 STX2P32856 288 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 CETN2P41208 172 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 STRN3Q13033 797 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 PLEKHA7Q6IQ23 1121 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 FNBP1Q96RU3 617 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 STYXL1Q9Y6J8 313 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 SIP14410 1827 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 NFASCO94856 1347 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 NOMO3P69849 1222 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 SF3A3Q12874 501 aaKnown RBP eCLIP20.49■□□□□ 0.87
FAM239A-202ENST00000438107 NR1H3Q13133 447 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 MPP2Q14168 576 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 TBC1D1Q86TI0 1168 aaPredicted RBP20.49■□□□□ 0.87
FAM239A-202ENST00000438107 VSIG10LQ86VR7 867 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 RTKN2Q8IZC4 609 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 ABRAQ8N0Z2 381 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 ANKRD35Q8N283 1001 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 ZCCHC9Q8N567 271 aaKnown RBP20.49■□□□□ 0.87
FAM239A-202ENST00000438107 AGBL3Q8NEM8 1001 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 ZBED3Q96IU2 234 aaPredicted RBP20.49■□□□□ 0.87
FAM239A-202ENST00000438107 ATP6V0A4Q9HBG4 840 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 RXFP1Q9HBX9 757 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 XPNPEP1Q9NQW7 623 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 DNAJC17Q9NVM6 304 aaKnown RBP20.49■□□□□ 0.87
FAM239A-202ENST00000438107 ADAM22Q9P0K1 906 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 BAIAP2L1Q9UHR4 511 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 COL4A5P29400 1685 aa20.49■□□□□ 0.87
FAM239A-202ENST00000438107 A0A1B0GUA9 196 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 PSAPP07602 524 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 PIK3CAP42336 1068 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 SOX10P56693 466 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 TAS2R40P59535 323 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 COPS2P61201 443 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 MAMLD1Q13495 774 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 ACVR2BQ13705 512 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 RNF43Q68DV7 783 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 CYP4X1Q8N118 509 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 TGS1Q96RS0 853 aaKnown RBP20.48■□□□□ 0.87
FAM239A-202ENST00000438107 HEMGNQ9BXL5 484 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 CXorf56Q9H5V9 222 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 ECT2Q9H8V3 914 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 CETPP11597 493 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 NF2P35240 595 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 LIG4P49917 911 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 C1QBPQ07021 282 aaKnown RBP20.48■□□□□ 0.87
FAM239A-202ENST00000438107 TDRD10Q5VZ19 366 aaKnown RBP20.48■□□□□ 0.87
FAM239A-202ENST00000438107 TCP11Q8WWU5 503 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 UBN1Q9NPG3 1134 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 CNTN6Q9UQ52 1028 aa20.48■□□□□ 0.87
FAM239A-202ENST00000438107 ALADP13716 330 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms