RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 TMEM132DQ14C87 1099 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 GNASQ5JWF2 1037 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 TAF3Q5VWG9 929 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 TMEM270Q6UE05 265 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 UBR7Q8N806 425 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 RBBP8NLQ8NC74 664 aaPredicted RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 MSANTD4Q8NCY6 345 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 TRIB2Q92519 343 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 CPB2Q96IY4 423 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 CYP3A43Q9HB55 503 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 AVENQ9NQS1 362 aaPredicted RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.45■□□□□ 0.22
SGCE-205ENST00000437425 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 LCMT1Q9UIC8 334 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 TARSL2A2RTX5 802 aaKnown RBP16.44■□□□□ 0.22
SGCE-205ENST00000437425 MIF4GDA9UHW6 222 aaKnown RBP16.44■□□□□ 0.22
SGCE-205ENST00000437425 M0QZ92 97 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 SRGAP2O75044 1071 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 CAPN15O75808 1086 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 LSM8O95777 96 aaKnown RBP16.44■□□□□ 0.22
SGCE-205ENST00000437425 FTCDO95954 541 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 BEX3Q00994 111 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 NAA30Q147X3 362 aaPredicted RBP16.44■□□□□ 0.22
SGCE-205ENST00000437425 BRD3Q15059 726 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 SLC10A6Q3KNW5 377 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 ZNF667Q5HYK9 610 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 SPOPLQ6IQ16 392 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 CEP120Q8N960 986 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 CAPZA3Q96KX2 299 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 CAPNS2Q96L46 248 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 RPS6KC1Q96S38 1066 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 PCDHB18PQ96TA0 734 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 ZNF518BQ9C0D4 1074 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 XYLT2Q9H1B5 865 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 ABCB6Q9NP58 842 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 TAS2R14Q9NYV8 317 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 CTTNBP2NLQ9P2B4 639 aa16.44■□□□□ 0.22
SGCE-205ENST00000437425 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.44■□□□□ 0.22
SGCE-205ENST00000437425 MYH10P35580 1976 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 CYP1A1P04798 512 aaPredicted RBP16.43■□□□□ 0.22
SGCE-205ENST00000437425 UNGP13051 313 aaPredicted RBP16.43■□□□□ 0.22
SGCE-205ENST00000437425 NSFP46459 744 aaKnown RBP16.43■□□□□ 0.22
SGCE-205ENST00000437425 RBP5P82980 135 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 CENPCQ03188 943 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 ARHGEF6Q15052 776 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 LIN9Q5TKA1 542 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 JADE1Q6IE81 842 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 NT5DC3Q86UY8 548 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 SESTD1Q86VW0 696 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 PALB2Q86YC2 1186 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 MMGT1Q8N4V1 131 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 TRPV1Q8NER1 839 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 DNAJB3Q8WWF6 145 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 LENG1Q96BZ8 264 aaPredicted RBP16.43■□□□□ 0.22
SGCE-205ENST00000437425 HES6Q96HZ4 224 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 ZIC5Q96T25 663 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 PPP1R16BQ96T49 567 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 MMS19Q96T76 1030 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 ARID3AQ99856 593 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 STXBP5LQ9Y2K9 1186 aa16.43■□□□□ 0.22
SGCE-205ENST00000437425 CCDC151A5D8V7 595 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 TREHO43280 583 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 MED7O43513 233 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 XPOTO43592 962 aaKnown RBP16.42■□□□□ 0.22
SGCE-205ENST00000437425 BUB1BO60566 1050 aaPredicted RBP16.42■□□□□ 0.22
SGCE-205ENST00000437425 ERLIN1O75477 346 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 CST5P28325 142 aaPredicted RBP16.42■□□□□ 0.22
SGCE-205ENST00000437425 HOXA11P31270 313 aaPredicted RBP16.42■□□□□ 0.22
SGCE-205ENST00000437425 PRKCZQ05513 592 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 SNX17Q15036 470 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 GLE1Q53GS7 698 aaKnown RBP16.42■□□□□ 0.22
SGCE-205ENST00000437425 RUFY4Q6ZNE9 571 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 RPAINQ86UA6 219 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 CDR2LQ86X02 465 aaPredicted RBP16.42■□□□□ 0.22
SGCE-205ENST00000437425 C1orf127Q8N9H9 656 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 OSMRQ99650 979 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 BCO2Q9BYV7 579 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 TRIM6Q9C030 488 aaPredicted RBP16.42■□□□□ 0.22
SGCE-205ENST00000437425 CISHQ9NSE2 258 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 GABRQQ9UN88 632 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 CEP83Q9Y592 693 aa16.42■□□□□ 0.22
SGCE-205ENST00000437425 ZNF185O15231 689 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 CSDE1O75534 798 aaKnown RBP16.41■□□□□ 0.22
SGCE-205ENST00000437425 NFICP08651 508 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 KRT19P08727 400 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 PAEPP09466 180 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 MAP2K2P36507 400 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 UBL4BQ8N7F7 174 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 PCSK9Q8NBP7 692 aaKnown RBP16.41■□□□□ 0.22
SGCE-205ENST00000437425 SPATA4Q8NEY3 305 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 ACTRT1Q8TDG2 376 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 COG1Q8WTW3 980 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 ZNF653Q96CK0 615 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 ARHGEF26Q96DR7 871 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 NAP1L3Q99457 506 aaPredicted RBP16.41■□□□□ 0.22
SGCE-205ENST00000437425 MRPL47Q9HD33 250 aaKnown RBP16.41■□□□□ 0.22
SGCE-205ENST00000437425 OSGEPQ9NPF4 335 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 GTF2IRD1Q9UHL9 959 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 RAB21Q9UL25 225 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms