RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01516-201ENST00000436140 LPPQ93052 612 aa11.67□□□□□ -0.54
LINC01516-201ENST00000436140 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
LINC01516-201ENST00000436140 ZMAT2Q96NC0 199 aaKnown RBP11.67□□□□□ -0.54
LINC01516-201ENST00000436140 XPNPEP3Q9NQH7 507 aa11.67□□□□□ -0.54
LINC01516-201ENST00000436140 TJP2Q9UDY2 1190 aa11.67□□□□□ -0.54
LINC01516-201ENST00000436140 TNFSF13BQ9Y275 285 aa11.67□□□□□ -0.54
LINC01516-201ENST00000436140 PJA2O43164 708 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 TOMM70O94826 608 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 PIGRP01833 764 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 ASGR1P07306 291 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 CLTAP09496 248 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 RARBP10826 455 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 EIF4BP23588 611 aaKnown RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 CPT1AP50416 773 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 PURAQ00577 322 aaKnown RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 TRADDQ15628 312 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 KCNA10Q16322 511 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 PAN2Q504Q3 1202 aaKnown RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 CYP4A22Q5TCH4 519 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 C15orf39Q6ZRI6 1047 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 CEP112Q8N8E3 955 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 USP6NLQ92738 828 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 KRT35Q92764 455 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 LRRC1Q9BTT6 524 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 NUP85Q9BW27 656 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 MAF1Q9H063 256 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 ST7Q9NRC1 585 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 CNOT8Q9UFF9 292 aaKnown RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 FBXL5Q9UKA1 691 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 NOD1Q9Y239 953 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 KIAA0100Q14667 2235 aaKnown RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 C17orf102A2RUQ5 167 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 GOLGA8SH3BPF8 625 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 PDGFRBP09619 1106 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 TM4SF4P48230 202 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 HSP90AA2PQ14568 343 aaPredicted RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 PAPD7Q5XG87 772 aaKnown RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 GDF6Q6KF10 455 aaPredicted RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 MMS22LQ6ZRQ5 1243 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 C12orf29Q8N999 325 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 UBA3Q8TBC4 463 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 RAET1EQ8TD07 263 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 TFAP2BQ92481 460 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 ACSF2Q96CM8 615 aaPredicted RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 TWNKQ96RR1 684 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 RBM12Q9NTZ6 932 aaKnown RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 TRMT13Q9NUP7 481 aaKnown RBP11.66□□□□□ -0.54
LINC01516-201ENST00000436140 KLHL11Q9NVR0 708 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 TUBGCP4Q9UGJ1 667 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 SIX4Q9UIU6 781 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 SNX9Q9Y5X1 595 aa11.66□□□□□ -0.54
LINC01516-201ENST00000436140 NRCAMQ92823 1304 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 MAPK13O15264 365 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 GAS2O43903 313 aaKnown RBP11.65□□□□□ -0.54
LINC01516-201ENST00000436140 PAFAH1B1P43034 410 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 VSNL1P62760 191 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 FAM118BQ9BPY3 351 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 TRIM31Q9BZY9 425 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 NR2E1Q9Y466 385 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 ALG6Q9Y672 507 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 GPR32O75388 356 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 ITGA4P13612 1032 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 THPOP40225 353 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 CDR2Q01850 454 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 NOGQ13253 232 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 SNX17Q15036 470 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 CCDC142Q17RM4 750 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 EXOC8Q8IYI6 725 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 ZNF606Q8WXB4 792 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 SOCS4Q8WXH5 440 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 EMID1Q96A84 441 aaPredicted RBP11.65□□□□□ -0.54
LINC01516-201ENST00000436140 KRT12Q99456 494 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 ZSWIM1Q9BR11 485 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 ADAMTS10Q9H324 1103 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 ANKZF1Q9H8Y5 726 aa11.65□□□□□ -0.54
LINC01516-201ENST00000436140 DMGDHQ9UI17 866 aaKnown RBP11.65□□□□□ -0.54
LINC01516-201ENST00000436140 O00370 1275 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 SPOPO43791 374 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 GHRP10912 638 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 ACO1P21399 889 aaKnown RBP11.64□□□□□ -0.55
LINC01516-201ENST00000436140 GPC5P78333 572 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 ZNF667Q5HYK9 610 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 WDR49Q8IV35 697 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 C1orf131Q8NDD1 294 aaKnown RBP11.64□□□□□ -0.55
LINC01516-201ENST00000436140 SPATA4Q8NEY3 305 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 SH3TC2Q8TF17 1288 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 IFT81Q8WYA0 676 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 ANKRD7Q92527 254 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 SYT11Q9BT88 431 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 SDCBP2Q9H190 292 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 FAM49BQ9NUQ9 324 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 NOC2LQ9Y3T9 749 aaKnown RBP11.64□□□□□ -0.55
LINC01516-201ENST00000436140 A0A1B0GUA9 196 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 ANKRD62A6NC57 917 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 RECQL4O94761 1208 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 ASS1P00966 412 aaKnown RBP11.64□□□□□ -0.55
LINC01516-201ENST00000436140 COMTP21964 271 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 SCP2P22307 547 aa11.64□□□□□ -0.55
LINC01516-201ENST00000436140 NSFP46459 744 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms