RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 MCTP1Q6DN14 999 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 TANGO2Q6ICL3 276 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 PDZD4Q76G19 769 aaPredicted RBP17.15■□□□□ 0.34
CALD1-208ENST00000435928 KIAA2013Q8IYS2 634 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 APPL2Q8NEU8 664 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 SPIRE2Q8WWL2 714 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 ELSPBP1Q96BH3 223 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 KIF2CQ99661 725 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 NTPCRQ9BSD7 190 aaKnown RBP17.15■□□□□ 0.34
CALD1-208ENST00000435928 PLA2G2FQ9BZM2 168 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 TUBGCP4Q9UGJ1 667 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 KCNG1Q9UIX4 513 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 FBXO4Q9UKT5 387 aa17.15■□□□□ 0.34
CALD1-208ENST00000435928 SEC24AO95486 1093 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 MAPTP10636 758 aaKnown RBP17.14■□□□□ 0.33
CALD1-208ENST00000435928 CPB1P15086 417 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 MATR3P43243 847 aaKnown RBP eCLIP17.14■□□□□ 0.33
CALD1-208ENST00000435928 ATP2C1P98194 919 aaPredicted RBP17.14■□□□□ 0.33
CALD1-208ENST00000435928 SLC10A6Q3KNW5 377 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 RILPL1Q5EBL4 403 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 HYIQ5T013 277 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 IQCEQ6IPM2 695 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 ZPBP2Q6X784 338 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 ZNF852Q6ZMS4 543 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 TMEM161BQ8NDZ6 487 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 RUBCNQ92622 972 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 DDX12PQ92771 950 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 DNASE1L2Q92874 299 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 TCEAL4Q96EI5 215 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 CDK5RAP3Q96JB5 506 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 TBC1D32Q96NH3 1257 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 HEBP1Q9NRV9 189 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 KCND2Q9NZV8 630 aa17.14■□□□□ 0.33
CALD1-208ENST00000435928 MRPS17Q9Y2R5 130 aaKnown RBP17.14■□□□□ 0.33
CALD1-208ENST00000435928 NCAM2O15394 837 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 CLDN3O15551 220 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 MICAL2O94851 1124 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 CXCL8P10145 99 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 FCARP24071 287 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 TARSP26639 723 aaKnown RBP17.13■□□□□ 0.33
CALD1-208ENST00000435928 MCL1Q07820 350 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 ADCY1Q08828 1119 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 GRM2Q14416 872 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 FAM78AQ5JUQ0 283 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 CYP4A22Q5TCH4 519 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 POTEHQ6S545 545 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 KCTD17Q8N5Z5 321 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 SYT2Q8N9I0 419 aaPredicted RBP17.13■□□□□ 0.33
CALD1-208ENST00000435928 BICD1Q96G01 975 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 NELL2Q99435 816 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 BRD9Q9H8M2 597 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 ZFP14Q9HCL3 533 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 AFF4Q9UHB7 1163 aaKnown RBP17.13■□□□□ 0.33
CALD1-208ENST00000435928 MAFFQ9ULX9 164 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 PCDHB8Q9UN66 801 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 ANK1P16157 1881 aa17.13■□□□□ 0.33
CALD1-208ENST00000435928 TSC2P49815 1807 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 VWA3AA6NCI4 1184 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 H0YCG3 227 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 SPTLC1O15269 473 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 MARCKSP29966 332 aaPredicted RBP17.12■□□□□ 0.33
CALD1-208ENST00000435928 CCR2P41597 374 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 RPS9P46781 194 aaKnown RBP17.12■□□□□ 0.33
CALD1-208ENST00000435928 SLC12A3P55017 1021 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 CSTF1Q05048 431 aaKnown RBP17.12■□□□□ 0.33
CALD1-208ENST00000435928 TWF1Q12792 350 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 CLDN23Q96B33 292 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 ZNF512Q96ME7 567 aaPredicted RBP17.12■□□□□ 0.33
CALD1-208ENST00000435928 ASB16Q96NS5 453 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 PNMA5Q96PV4 448 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 PLIN2Q99541 437 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 TRMT61BQ9BVS5 477 aaKnown RBP17.12■□□□□ 0.33
CALD1-208ENST00000435928 ASAH2Q9NR71 780 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 PCDHGA2Q9Y5H1 932 aa17.12■□□□□ 0.33
CALD1-208ENST00000435928 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.12■□□□□ 0.33
CALD1-208ENST00000435928 CLTAP09496 248 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 PLA2G4BP0C869 781 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
CALD1-208ENST00000435928 YWHAHQ04917 246 aaPredicted RBP17.11■□□□□ 0.33
CALD1-208ENST00000435928 PPP2R3AQ06190 1150 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 SPAG1Q07617 926 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 RNF19BQ6ZMZ0 732 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 SUMF1Q8NBK3 374 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 LEMD2Q8NC56 503 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 ATRIPQ8WXE1 791 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 RMDN1Q96DB5 314 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 BORCS6Q96GS4 357 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 PLEKHA5Q9HAU0 1116 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 CEP72Q9P209 647 aa17.11■□□□□ 0.33
CALD1-208ENST00000435928 LARSQ9P2J5 1176 aaKnown RBP17.11■□□□□ 0.33
CALD1-208ENST00000435928 CEP250Q9BV73 2442 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 NUP210Q8TEM1 1887 aaPredicted RBP17.1■□□□□ 0.33
CALD1-208ENST00000435928 M0QZQ0 153 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 HNRNPDLO14979 420 aaKnown RBP17.1■□□□□ 0.33
CALD1-208ENST00000435928 MYL4P12829 197 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 LIG4P49917 911 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 NCKAP1LP55160 1127 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms