RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 AVENQ9NQS1 362 aaPredicted RBP14.65□□□□□ -0.06
CDC42EP1-204ENST00000434728 ASAH2Q9NR71 780 aa14.65□□□□□ -0.06
CDC42EP1-204ENST00000434728 FBXL5Q9UKA1 691 aa14.65□□□□□ -0.06
CDC42EP1-204ENST00000434728 CDV3Q9UKY7 258 aaKnown RBP14.65□□□□□ -0.06
CDC42EP1-204ENST00000434728 LIMCH1Q9UPQ0 1083 aa14.65□□□□□ -0.06
CDC42EP1-204ENST00000434728 MYH11P35749 1972 aa14.65□□□□□ -0.06
CDC42EP1-204ENST00000434728 ABLIM3O94929 683 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 GDI1P31150 447 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 NRLP54845 237 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 HMGN5P82970 282 aaKnown RBP14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 NBR1Q14596 966 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 ECM1Q16610 540 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 FAM78AQ5JUQ0 283 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 YAF2Q8IY57 180 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 C18orf25Q96B23 403 aaPredicted RBP14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 CLDN23Q96B33 292 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 TCEAL4Q96EI5 215 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 LLPHQ9BRT6 129 aaKnown RBP14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 FAM126AQ9BYI3 521 aaPredicted RBP14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 TMEM134Q9H6X4 195 aa14.64□□□□□ -0.07
CDC42EP1-204ENST00000434728 TICRRQ7Z2Z1 1910 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 E9PMD0 336 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 SLC16A4O15374 487 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 TBC1D4O60343 1298 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 SEC24AO95486 1093 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 KCNE1P15382 129 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 PSMC3P17980 439 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 SMTNP53814 917 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 LMNB2Q03252 620 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 TWF1Q12792 350 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 MTAPQ13126 283 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 PTGDRQ13258 359 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 PDIA5Q14554 519 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 NOLC1Q14978 699 aaKnown RBP eCLIP14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 CD300LGQ6UXG3 332 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 ALKAL1Q6UXT8 129 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 USP37Q86T82 979 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 LEMD2Q8NC56 503 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 ZBTB44Q8NCP5 570 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 FBXO18Q8NFZ0 1043 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 FAM3CQ92520 227 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 SMARCD2Q92925 531 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 BICD1Q96G01 975 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 SUSD3Q96L08 255 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 ZMAT2Q96NC0 199 aaKnown RBP14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 ASB16Q96NS5 453 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 EPC1Q9H2F5 836 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 DLL3Q9NYJ7 618 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 CNTN3Q9P232 1028 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 PIAS3Q9Y6X2 628 aa14.63□□□□□ -0.07
CDC42EP1-204ENST00000434728 DNAH14Q0VDD8 3507 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 PRR5-ARHGAP8B1AHC4 643 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 ZNF263O14978 683 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 MICAL2O94851 1124 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 ARHGAP8P85298 464 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 RAD51AP2Q09MP3 1159 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 XKR4Q5GH76 650 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 PRSS36Q5K4E3 855 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 PRR23BQ6ZRT6 265 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 ZSCAN18Q8TBC5 510 aaPredicted RBP14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 FAM200AQ8TCP9 573 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 CSGALNACT1Q8TDX6 532 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 DEPDC1BQ8WUY9 529 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 CDK5RAP3Q96JB5 506 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 IER2Q9BTL4 223 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 RUSC1Q9BVN2 902 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 C17orf75Q9HAS0 396 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 PRMT8Q9NR22 394 aaPredicted RBP14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 ARHGAP28Q9P2N2 729 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 AFF4Q9UHB7 1163 aaKnown RBP14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 KCNG1Q9UIX4 513 aa14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 TPRP12270 2363 aaKnown RBP14.62□□□□□ -0.07
CDC42EP1-204ENST00000434728 SFI1A8K8P3 1242 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 LAD1O00515 517 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 CLDN3O15551 220 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 TOM1L1O75674 476 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 FCARP24071 287 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 CCR3P51677 355 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 YWHAHQ04917 246 aaPredicted RBP14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 ST3GAL1Q11201 340 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 PLD1Q13393 1074 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 LPAL2Q16609 132 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 SEZ6Q53EL9 994 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 RINT1Q6NUQ1 792 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 DTHD1Q6ZMT9 781 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 HS6ST3Q8IZP7 471 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 IGSF22Q8N9C0 903 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 DDX12PQ92771 950 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 TIPINQ9BVW5 301 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 CHRDQ9H2X0 955 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 ZNF334Q9HCZ1 680 aaPredicted RBP14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 PTPRHQ9HD43 1115 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 MAFFQ9ULX9 164 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 PCDHB8Q9UN66 801 aa14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 PDCD11Q14690 1871 aaKnown RBP14.61□□□□□ -0.07
CDC42EP1-204ENST00000434728 CACNA1BQ00975 2339 aa14.6□□□□□ -0.07
CDC42EP1-204ENST00000434728 PP2D1A8MPX8 630 aa14.6□□□□□ -0.07
CDC42EP1-204ENST00000434728 DPYSL4O14531 572 aa14.6□□□□□ -0.07
CDC42EP1-204ENST00000434728 XPOTO43592 962 aaKnown RBP14.6□□□□□ -0.07
CDC42EP1-204ENST00000434728 GJA1P17302 382 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms