RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 CUL2Q13617 745 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 ZNF667Q5HYK9 610 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 LMBRD2Q68DH5 695 aaPredicted RBP16.53■□□□□ 0.24
RBM39-213ENST00000433027 VPS36Q86VN1 386 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 NPAS4Q8IUM7 802 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 TNS4Q8IZW8 715 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 PPM1KQ8N3J5 372 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 SPATA18Q8TC71 538 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 URGCPQ8TCY9 931 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 MRPL9Q9BYD2 267 aaKnown RBP16.53■□□□□ 0.24
RBM39-213ENST00000433027 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 SIX4Q9UIU6 781 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 CNTN6Q9UQ52 1028 aa16.53■□□□□ 0.24
RBM39-213ENST00000433027 LRRC53A6NM62 1247 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 PIRO00625 290 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 CCP110O43303 1012 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 CAPN15O75808 1086 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 ITGB3P05106 788 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 SKILP12757 684 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 EN2P19622 333 aaPredicted RBP16.52■□□□□ 0.24
RBM39-213ENST00000433027 CYP2C18P33260 490 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
RBM39-213ENST00000433027 RAPGEF1Q13905 1077 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 DRAP1Q14919 205 aaPredicted RBP16.52■□□□□ 0.24
RBM39-213ENST00000433027 DPH6Q7L8W6 267 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 RTN4RL1Q86UN2 441 aaPredicted RBP16.52■□□□□ 0.24
RBM39-213ENST00000433027 TXLNBQ8N3L3 684 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 ZMAT2Q96NC0 199 aaKnown RBP16.52■□□□□ 0.24
RBM39-213ENST00000433027 APOL6Q9BWW8 343 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 PPP1R12CQ9BZL4 782 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 NLRC4Q9NPP4 1024 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 PCDHB7Q9Y5E2 793 aa16.52■□□□□ 0.24
RBM39-213ENST00000433027 PTGESO14684 152 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 CST3P01034 146 aaPredicted RBP16.51■□□□□ 0.23
RBM39-213ENST00000433027 CYLC1P35663 651 aaPredicted RBP16.51■□□□□ 0.23
RBM39-213ENST00000433027 MLH1P40692 756 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 CCL23P55773 120 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 MYL6P60660 151 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 CCZ1BP86790 482 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 CCZ1P86791 482 aaPredicted RBP16.51■□□□□ 0.23
RBM39-213ENST00000433027 PPIGQ13427 754 aaKnown RBP eCLIP16.51■□□□□ 0.235e-21■□□□□ 10
RBM39-213ENST00000433027 ASIC2Q16515 512 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 PTPN21Q16825 1174 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 SV2CQ496J9 727 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 C9orf57Q5W0N0 161 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 ZNF677Q86XU0 584 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 TMEM139Q8IV31 216 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 FAM71AQ8IYT1 594 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 GSTCDQ8NEC7 633 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 LINC01599Q8WXQ3 324 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 HPDLQ96IR7 371 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 GAD1Q99259 594 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 BCO2Q9BYV7 579 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 OSBPL7Q9BZF2 842 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 KCND1Q9NSA2 647 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 GDAP2Q9NXN4 497 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 LRFN2Q9ULH4 789 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 AGAP1Q9UPQ3 857 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 ZKSCAN5Q9Y2L8 839 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 MICAL3Q7RTP6 2002 aa16.51■□□□□ 0.23
RBM39-213ENST00000433027 ATP8B3O60423 1300 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 RNF225M0QZC1 329 aaPredicted RBP16.5■□□□□ 0.23
RBM39-213ENST00000433027 OFD1O75665 1012 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 IPO7O95373 1038 aaKnown RBP16.5■□□□□ 0.23
RBM39-213ENST00000433027 KRT19P08727 400 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 POLR2BP30876 1174 aaKnown RBP16.5■□□□□ 0.23
RBM39-213ENST00000433027 TAF6P49848 677 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 TNNC1P63316 161 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 TUSC3Q13454 348 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 NOMO2Q5JPE7 1267 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 PPP1R2P3Q6NXS1 205 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 WDR59Q6PJI9 974 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 ARHGEF19Q8IW93 802 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 ABI1Q8IZP0 508 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 CRIPAKQ8N1N5 446 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 SCLYQ96I15 445 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 LUC7LQ9NQ29 371 aaKnown RBP16.5■□□□□ 0.23
RBM39-213ENST00000433027 NUB1Q9Y5A7 615 aa16.5■□□□□ 0.23
RBM39-213ENST00000433027 LTBP2Q14767 1821 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 TRIM43BA6NCK2 446 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 TMEM189-UBE2V1I3L0A0 370 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 KLHL30Q0D2K2 578 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 NAB2Q15742 525 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 C10orf76Q5T2E6 689 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 IRF2BP2Q7Z5L9 587 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 ZSCAN30Q86W11 494 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 TRIM43Q96BQ3 446 aaPredicted RBP16.49■□□□□ 0.23
RBM39-213ENST00000433027 CCDC42Q96M95 316 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 KREMEN1Q96MU8 473 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 GPR88Q9GZN0 384 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 KCNF1Q9H3M0 494 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 APOBEC3GQ9HC16 384 aaKnown RBP16.49■□□□□ 0.23
RBM39-213ENST00000433027 IL23AQ9NPF7 189 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 KLK14Q9P0G3 267 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.49■□□□□ 0.23
RBM39-213ENST00000433027 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
RBM39-213ENST00000433027 TACC1O75410 805 aa16.48■□□□□ 0.23
RBM39-213ENST00000433027 PTK2Q05397 1052 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms