RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 ALCAMQ13740 583 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 SLFN13Q68D06 897 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 ZNF554Q86TJ5 538 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 CCDC117Q8IWD4 279 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 XXYLT1Q8NBI6 393 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 SENP7Q9BQF6 1050 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 TMEM120AQ9BXJ8 343 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 UVRAGQ9P2Y5 699 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 DKK3Q9UBP4 350 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 HPSEQ9Y251 543 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 MRPL11Q9Y3B7 192 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 AK9Q5TCS8 1911 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 SMAPO00193 183 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 ABLIM1O14639 778 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 BCL10O95999 233 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 SNRPAP09012 282 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 WEE2P0C1S8 567 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 SLC16A2P36021 539 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 MCAMP43121 646 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 ST13P50502 369 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 CDK17Q00537 523 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 CHRNDQ07001 517 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 TRIM25Q14258 630 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 EPHA10Q5JZY3 1008 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 CHURC1Q8WUH1 139 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 STK33Q9BYT3 514 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 PCSK1NQ9UHG2 260 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 SH3GLB1Q9Y371 365 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 USP42Q9H9J4 1324 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 CDK12Q9NYV4 1490 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 TBC1D12O60347 775 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 TPST1O60507 370 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 PSMG1O95456 288 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 CALB1P05937 261 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 KRT7P08729 469 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 FNTAP49354 379 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 UBXN2AP68543 259 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 PDAP1Q13442 181 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 FAM118BQ9BPY3 351 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 MTA3Q9BTC8 594 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 UNC45AQ9H3U1 944 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 GDF3Q9NR23 364 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 STMN3Q9NZ72 180 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 TMCO1Q9UM00 188 aa10.94□□□□□ -0.66
PKNOX1-203ENST00000432907 FAM196BA6NMK8 535 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 GOLGA8CPA6NN73 597 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 AP3B1O00203 1094 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 UNC5CO95185 931 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 OSBPP22059 807 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 RUNX1T1Q06455 604 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ANO4Q32M45 955 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 NUP93Q8N1F7 819 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 PSPC1Q8WXF1 523 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ATXN7L3BQ96GX2 97 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 SNX13Q9Y5W8 968 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 SMIM31A0A1B0GVY4 71 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 DNALI1O14645 258 aaPredicted RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 SLC9A1P19634 815 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 TTLL12Q14166 644 aaPredicted RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 FASTKD1Q53R41 847 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 CDC42BPGQ6DT37 1551 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 TMEM270Q6UE05 265 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 DGKHQ86XP1 1220 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ZCCHC7Q8N3Z6 543 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ITFG2Q969R8 447 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ABHD8Q96I13 439 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 MED10Q9BTT4 135 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 BBS2Q9BXC9 721 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ZNF335Q9H4Z2 1342 aaPredicted RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 COG4Q9H9E3 785 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ZC3H7BQ9UGR2 993 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 CNOT7Q9UIV1 285 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 AKR1B1P15121 316 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 TFAMQ00059 246 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 MTM1Q13496 603 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ZNF394Q53GI3 561 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 DEPDC1Q5TB30 811 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 CDKAL1Q5VV42 579 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 PODNQ7Z5L7 613 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 CREG2Q8IUH2 290 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 DDX50Q9BQ39 737 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 KLHL11Q9NVR0 708 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 DDX56Q9NY93 547 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 USP17L3A6NCW0 530 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 USP17L4A6NCW7 530 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ERVV-2B6SEH9 535 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ENTPD5O75356 428 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 LGR5O75473 907 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 TSPAN9O75954 239 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 VAMP7P51809 220 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 ZC3H12BQ5HYM0 836 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 CEP78Q5JTW2 689 aa10.93□□□□□ -0.66
PKNOX1-203ENST00000432907 SYCP2LQ5T4T6 812 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms