RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 CFAP58Q5T655 872 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 SEL1L2Q5TEA6 688 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 WDR49Q8IV35 697 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 BRSK2Q8IWQ3 736 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 LRRC45Q96CN5 670 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 VCPIP1Q96JH7 1222 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 TCHPQ9BT92 498 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 PI4K2AQ9BTU6 479 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 IMPG2Q9BZV3 1241 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 HAPLN2Q9GZV7 340 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 DDX47Q9H0S4 455 aaKnown RBP13.72□□□□□ -0.21
DDX56-204ENST00000431640 ABHD16BQ9H3Z7 469 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 SLC5A4Q9NY91 659 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 ANKFY1Q9P2R3 1169 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 CNTN6Q9UQ52 1028 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 TRPC6Q9Y210 931 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 PCDHA3Q9Y5H8 950 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 CNTNAP2Q9UHC6 1331 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 AGPSO00116 658 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 OGTO15294 1046 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 MSCO60682 206 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 VNN1O95497 513 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 UNGP13051 313 aaPredicted RBP13.71□□□□□ -0.21
DDX56-204ENST00000431640 COMTP21964 271 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 SLC1A1P43005 524 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 PEX5P50542 639 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 CACNB2Q08289 660 aaPredicted RBP13.71□□□□□ -0.21
DDX56-204ENST00000431640 EFCAB13Q8IY85 973 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 SEC14L1Q92503 715 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 ACO2Q99798 780 aaKnown RBP13.71□□□□□ -0.21
DDX56-204ENST00000431640 SH3GL2Q99962 352 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 CCDC113Q9H0I3 377 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 CNOT8Q9UFF9 292 aaKnown RBP13.71□□□□□ -0.21
DDX56-204ENST00000431640 GNEQ9Y223 722 aaKnown RBP13.71□□□□□ -0.21
DDX56-204ENST00000431640 PTCH2Q9Y6C5 1203 aa13.71□□□□□ -0.21
DDX56-204ENST00000431640 A6NNZ2 444 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 SPOPO43791 374 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 CYP1A1P04798 512 aaPredicted RBP13.71□□□□□ -0.22
DDX56-204ENST00000431640 PRKCBP05771 671 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 CLTAP09496 248 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 SRGAP2CP0DJJ0 459 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 CCND3P30281 292 aaPredicted RBP13.71□□□□□ -0.22
DDX56-204ENST00000431640 CHRNA3P32297 505 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 GBP1P32455 592 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 POU5F1BQ06416 359 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 MCL1Q07820 350 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 LAMC2Q13753 1193 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 HLTFQ14527 1009 aaKnown RBP eCLIP13.71□□□□□ -0.22
DDX56-204ENST00000431640 DUOXA2Q1HG44 320 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 TUBB8Q3ZCM7 444 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 ZNF484Q5JVG2 852 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 LIN9Q5TKA1 542 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 DCAF12L1Q5VU92 463 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 TRIM50Q86XT4 487 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 CD302Q8IX05 232 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 MCOLN2Q8IZK6 566 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 IQCKQ8N0W5 287 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 CD101Q93033 1021 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 ACP6Q9NPH0 428 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 AMACRQ9UHK6 382 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 MTUS1Q9ULD2 1270 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 TRIM17Q9Y577 477 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 PCDHB4Q9Y5E5 795 aa13.71□□□□□ -0.22
DDX56-204ENST00000431640 TMEM110-MUSTN1A8MSY1 372 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 ACKR2O00590 384 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 PODXLO00592 558 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 ERLIN2O94905 339 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 ITGA4P13612 1032 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 ACO1P21399 889 aaKnown RBP13.7□□□□□ -0.22
DDX56-204ENST00000431640 CTNNA1P35221 906 aaKnown RBP13.7□□□□□ -0.22
DDX56-204ENST00000431640 HSPA9P38646 679 aaKnown RBP13.7□□□□□ -0.22
DDX56-204ENST00000431640 NSFP46459 744 aaKnown RBP13.7□□□□□ -0.22
DDX56-204ENST00000431640 DRG2P55039 364 aaKnown RBP13.7□□□□□ -0.22
DDX56-204ENST00000431640 RWDD2BP57060 319 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 POU5F1Q01860 360 aaKnown RBP13.7□□□□□ -0.22
DDX56-204ENST00000431640 NCOA4Q13772 614 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 SGSM1Q2NKQ1 1148 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 DUSP28Q4G0W2 176 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 MAP3K21Q5TCX8 1036 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 LMBRD2Q68DH5 695 aaPredicted RBP13.7□□□□□ -0.22
DDX56-204ENST00000431640 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 RNF149Q8NC42 400 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 C1orf131Q8NDD1 294 aaKnown RBP13.7□□□□□ -0.22
DDX56-204ENST00000431640 MAIP1Q8WWC4 291 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 BEGAINQ9BUH8 593 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 FAM204AQ9H8W3 233 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 MRPL47Q9HD33 250 aaKnown RBP13.7□□□□□ -0.22
DDX56-204ENST00000431640 ERAP1Q9NZ08 941 aa13.7□□□□□ -0.22
DDX56-204ENST00000431640 ESYT3A0FGR9 886 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 GOLGA6CA6NDK9 693 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 MYADML2A6NDP7 307 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 ZSCAN5CA6NGD5 496 aaPredicted RBP13.69□□□□□ -0.22
DDX56-204ENST00000431640 ZBTB42B2RXF5 422 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 MAGEB2O15479 319 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 GOLGA6DP0CG33 693 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 HSPA1AP0DMV8 641 aaKnown RBP13.69□□□□□ -0.22
DDX56-204ENST00000431640 HSPA1BP0DMV9 641 aaKnown RBP13.69□□□□□ -0.22
DDX56-204ENST00000431640 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
DDX56-204ENST00000431640 MARK3P27448 753 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms