RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 ASCL5Q7RTU5 278 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 DTWD2Q8NBA8 298 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 DDX12PQ92771 950 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 BICD1Q96G01 975 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 CALML4Q96GE6 196 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 EPSTI1Q96J88 318 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 KXD1Q9BQD3 176 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 IKZF4Q9H2S9 585 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 DLGAP2Q9P1A6 1054 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 FBXO2Q9UK22 296 aaPredicted RBP17.74■□□□□ 0.43
PTPRA-206ENST00000430705 NUB1Q9Y5A7 615 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 LACTBL1A8MY62 500 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 M0QZQ0 153 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 HNRNPDLO14979 420 aaKnown RBP17.73■□□□□ 0.43
PTPRA-206ENST00000430705 BMP15O95972 392 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 RHOP08100 348 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 ATF2P15336 505 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 NMT1P30419 496 aaKnown RBP17.73■□□□□ 0.43
PTPRA-206ENST00000430705 CCR2P41597 374 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 ARPP19P56211 112 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 GPC5P78333 572 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 MAP4K3Q8IVH8 894 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 TCEAL8Q8IYN2 117 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 MYCT1Q8N699 235 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 LARP4BQ92615 738 aaKnown RBP17.73■□□□□ 0.43
PTPRA-206ENST00000430705 RTP3Q9BQQ7 232 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 IRF2BPLQ9H1B7 796 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 PLEKHA5Q9HAU0 1116 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 PARVGQ9HBI0 331 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 AVENQ9NQS1 362 aaPredicted RBP17.73■□□□□ 0.43
PTPRA-206ENST00000430705 KCNH3Q9ULD8 1083 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 PCDHB8Q9UN66 801 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 INSL5Q9Y5Q6 135 aa17.73■□□□□ 0.43
PTPRA-206ENST00000430705 PATJQ8NI35 1801 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 A0A0B4J269 797 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 ANKRD63C9JTQ0 380 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 H0YCG3 227 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 OGTO15294 1046 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 TRAK2O60296 914 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 FAM13AO94988 1023 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 GLULP15104 373 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 FCARP24071 287 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 LIG4P49917 911 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 GTF2BQ00403 316 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 ANGPT1Q15389 498 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 CTXN3Q4LDR2 81 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 ZC2HC1CQ53FD0 456 aaPredicted RBP17.72■□□□□ 0.43
PTPRA-206ENST00000430705 FRMD5Q7Z6J6 570 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 TCEAL4Q96EI5 215 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 KIF12Q96FN5 646 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 PLA2G2FQ9BZM2 168 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 FOXQ1Q9C009 403 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 CCSER1Q9C0I3 900 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 KCNG1Q9UIX4 513 aa17.72■□□□□ 0.43
PTPRA-206ENST00000430705 CPSF3Q9UKF6 684 aaKnown RBP17.72■□□□□ 0.43
PTPRA-206ENST00000430705 TIMM13Q9Y5L4 95 aaPredicted RBP17.72■□□□□ 0.43
PTPRA-206ENST00000430705 ZNF292O60281 2723 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 PRR23AA6NEV1 266 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 H7C4K7 107 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 LRRN2O75325 713 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 MOSPD3O75425 235 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 CYP3A5P20815 502 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 MARCKSP29966 332 aaPredicted RBP17.71■□□□□ 0.43
PTPRA-206ENST00000430705 MATR3P43243 847 aaKnown RBP eCLIP17.71■□□□□ 0.432e-7■■■■□ 23.1
PTPRA-206ENST00000430705 PPP2R3AQ06190 1150 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 ZNF280DQ6N043 979 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 PHLDB3Q6NSJ2 640 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 RNF19BQ6ZMZ0 732 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 MTSS1LQ765P7 747 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 BEST2Q8NFU1 509 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 CRISPLD1Q9H336 500 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 CYP4F11Q9HBI6 524 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 CEP72Q9P209 647 aa17.71■□□□□ 0.43
PTPRA-206ENST00000430705 UBQLN1Q9UMX0 589 aaKnown RBP17.71■□□□□ 0.43
PTPRA-206ENST00000430705 MRPS23Q9Y3D9 190 aaKnown RBP17.71■□□□□ 0.43
PTPRA-206ENST00000430705 NCANO14594 1321 aa17.71■□□□□ 0.42
PTPRA-206ENST00000430705 MIA3Q5JRA6 1907 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 SHISA7A6NL88 538 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 PRRG1O14668 218 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 SPTLC1O15269 473 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 PPP1R37O75864 691 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 LRG1P02750 347 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 DCNP07585 359 aaKnown RBP17.7■□□□□ 0.42
PTPRA-206ENST00000430705 NFICP08651 508 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 OR4Q2P0C623 313 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 SYT1P21579 422 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 STARD6P59095 220 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 ADCY1Q08828 1119 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 TPGS2Q68CL5 300 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 JADE1Q6IE81 842 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 HS6ST3Q8IZP7 471 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 MCRS1Q96EZ8 462 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 CLIC6Q96NY7 704 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 CORO1BQ9BR76 489 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 MSTO1Q9BUK6 570 aa17.7■□□□□ 0.42
PTPRA-206ENST00000430705 DDX23Q9BUQ8 820 aaKnown RBP17.7■□□□□ 0.42
PTPRA-206ENST00000430705 AFF4Q9UHB7 1163 aaKnown RBP17.7■□□□□ 0.42
PTPRA-206ENST00000430705 DCHS1Q96JQ0 3298 aa17.69■□□□□ 0.42
PTPRA-206ENST00000430705 DMXL1Q9Y485 3027 aa17.69■□□□□ 0.42
PTPRA-206ENST00000430705 A0A087X0B3 334 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms