RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 TCHPQ9BT92 498 aa7.22□□□□□ -1.25
SMC6-205ENST00000430591 PCIF1Q9H4Z3 704 aa7.22□□□□□ -1.25
SMC6-205ENST00000430591 PANK4Q9NVE7 773 aa7.22□□□□□ -1.25
SMC6-205ENST00000430591 CCDC39Q9UFE4 941 aa7.22□□□□□ -1.25
SMC6-205ENST00000430591 ODF2LQ9ULJ1 636 aa7.22□□□□□ -1.25
SMC6-205ENST00000430591 GIT1Q9Y2X7 761 aa7.22□□□□□ -1.25
SMC6-205ENST00000430591 MORC2Q9Y6X9 1032 aaPredicted RBP7.22□□□□□ -1.25
SMC6-205ENST00000430591 MTCL1Q9Y4B5 1905 aaKnown RBP7.22□□□□□ -1.25
SMC6-205ENST00000430591 BDP1A6H8Y1 2624 aa7.22□□□□□ -1.25
SMC6-205ENST00000430591 DENND4AQ7Z401 1863 aa7.21□□□□□ -1.25
SMC6-205ENST00000430591 FRMD3A2A2Y4 597 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 MBTPS2O43462 519 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 KLRC4O43908 158 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 GADD45BO75293 160 aaPredicted RBP7.21□□□□□ -1.26
SMC6-205ENST00000430591 TOM1L1O75674 476 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 GCNT3O95395 438 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 ALDH2P05091 517 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 NFICP08651 508 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 CTSAP10619 480 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 MCF2P10911 925 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 CDK11BP21127 795 aaKnown RBP7.21□□□□□ -1.26
SMC6-205ENST00000430591 TKTP29401 623 aaKnown RBP7.21□□□□□ -1.26
SMC6-205ENST00000430591 PPM1AP35813 382 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 MATR3P43243 847 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMC6-205ENST00000430591 NDUFV1P49821 464 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 LIG4P49917 911 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 GTF2BQ00403 316 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 STRN3Q13033 797 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 TUSC3Q13454 348 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 HSP90AA2PQ14568 343 aaPredicted RBP7.21□□□□□ -1.26
SMC6-205ENST00000430591 DCAF4L1Q3SXM0 396 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 LEXMQ3ZCV2 418 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 XKR4Q5GH76 650 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 HERC4Q5GLZ8 1057 aaPredicted RBP7.21□□□□□ -1.26
SMC6-205ENST00000430591 KIAA0319Q5VV43 1072 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 LMBRD2Q68DH5 695 aaPredicted RBP7.21□□□□□ -1.26
SMC6-205ENST00000430591 MAP4K3Q8IVH8 894 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 NELFCDQ8IXH7 590 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 FAM178BQ8IXR5 827 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 EFHBQ8N7U6 833 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 NOC3LQ8WTT2 800 aaKnown RBP7.21□□□□□ -1.26
SMC6-205ENST00000430591 SLC22A17Q8WUG5 538 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 ATXN2LQ8WWM7 1075 aaKnown RBP7.21□□□□□ -1.26
SMC6-205ENST00000430591 ELMO3Q96BJ8 720 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 SPATA32Q96LK8 384 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 KLHL5Q96PQ7 755 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 UHRF1Q96T88 793 aaPredicted RBP7.21□□□□□ -1.26
SMC6-205ENST00000430591 ADPGKQ9BRR6 497 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 CBWD1Q9BRT8 395 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 HERC2P3Q9BVR0 1158 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 TIPINQ9BVW5 301 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 TRIM9Q9C026 710 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 S1PR5Q9H228 398 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 ATP13A2Q9NQ11 1180 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 KBTBD4Q9NVX7 518 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 LZTS1Q9Y250 596 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 HPSEQ9Y251 543 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 HCFC2Q9Y5Z7 792 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 NOTCH4Q99466 2003 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 MYO10Q9HD67 2058 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 PTPRJQ12913 1337 aa7.21□□□□□ -1.26
SMC6-205ENST00000430591 DOCK8Q8NF50 2099 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 COL4A3Q01955 1670 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 A0A0B4J269 797 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 TTC26A0AVF1 554 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 PODXLO00592 558 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 HNRNPDLO14979 420 aaKnown RBP7.2□□□□□ -1.26
SMC6-205ENST00000430591 CLIC2O15247 247 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 TEX28O15482 410 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 SLC26A4O43511 780 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 RFPL2O75678 378 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 PIGRP01833 764 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 SOD2P04179 222 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 THP07101 528 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 VARSP26640 1264 aaKnown RBP7.2□□□□□ -1.26
SMC6-205ENST00000430591 TXLNAP40222 546 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 ASIC1P78348 528 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 KRT17Q04695 432 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 UBE3AQ05086 875 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 EHHADHQ08426 723 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 NCBP1Q09161 790 aaKnown RBP7.2□□□□□ -1.26
SMC6-205ENST00000430591 SMC1AQ14683 1233 aaKnown RBP7.2□□□□□ -1.26
SMC6-205ENST00000430591 PCBP1Q15365 356 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMC6-205ENST00000430591 CCDC142Q17RM4 750 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 RARS2Q5T160 578 aaKnown RBP7.2□□□□□ -1.26
SMC6-205ENST00000430591 JADE1Q6IE81 842 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 ANKRD54Q6NXT1 300 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 ZPBP2Q6X784 338 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 CCDC73Q6ZRK6 1079 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 EPM2AIP1Q7L775 607 aaPredicted RBP7.2□□□□□ -1.26
SMC6-205ENST00000430591 CEP57Q86XR8 500 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 PALB2Q86YC2 1186 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 EFCAB13Q8IY85 973 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 FSIP1Q8NA03 581 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 KCNG4Q8TDN1 519 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 LRRN4Q8WUT4 740 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 RIN2Q8WYP3 895 aaPredicted RBP7.2□□□□□ -1.26
SMC6-205ENST00000430591 ACAP3Q96P50 834 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 TMEM175Q9BSA9 504 aa7.2□□□□□ -1.26
SMC6-205ENST00000430591 MSTO1Q9BUK6 570 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms