RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 C8orf37Q96NL8 207 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 THUMPD3Q9BV44 507 aaKnown RBP17.22■□□□□ 0.35
RIF1-204ENST00000430328 NMRK1Q9NWW6 199 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 KANSL1LA0AUZ9 987 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 CDH16O75309 829 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 EDRF1Q3B7T1 1238 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 TMEM270Q6UE05 265 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 C1orf131Q8NDD1 294 aaKnown RBP17.22■□□□□ 0.35
RIF1-204ENST00000430328 ARHGEF38Q9NXL2 777 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 TJP2Q9UDY2 1190 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 DNAJC12Q9UKB3 198 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 SERPINB9P50453 376 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 NMD3Q96D46 503 aaKnown RBP17.22■□□□□ 0.35
RIF1-204ENST00000430328 PHACTR1Q9C0D0 580 aa17.22■□□□□ 0.35
RIF1-204ENST00000430328 CLDN3O15551 220 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 GSTA3Q16772 222 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 CCDC80Q76M96 950 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 TSPYL6Q8N831 410 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 TBCKQ8TEA7 893 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 ZNF304Q9HCX3 659 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 PCSK1NQ9UHG2 260 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 ATP6V1HQ9UI12 483 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 KCNN4O15554 427 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 TNFRSF21O75509 655 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 COPAP53621 1224 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 DDR2Q16832 855 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 ARHGAP22Q7Z5H3 698 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 SGSM3Q96HU1 749 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 TOPORSQ9NS56 1045 aaPredicted RBP17.21■□□□□ 0.35
RIF1-204ENST00000430328 GCKRQ14397 625 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 CDC73Q6P1J9 531 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 SCGNO76038 276 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
RIF1-204ENST00000430328 RCVRNP35243 200 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
RIF1-204ENST00000430328 PPP1R2P1Q96PQ5 205 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 EPB42P16452 691 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 LPCAT2Q7L5N7 544 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 PID1Q7Z2X4 250 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 DHX35Q9H5Z1 703 aaKnown RBP17.21■□□□□ 0.35
RIF1-204ENST00000430328 PALD1Q9ULE6 856 aa17.21■□□□□ 0.35
RIF1-204ENST00000430328 RPN2P04844 631 aa17.21■□□□□ 0.34
RIF1-204ENST00000430328 CHRNB3Q05901 458 aa17.21■□□□□ 0.34
RIF1-204ENST00000430328 GFPT1Q06210 699 aaPredicted RBP17.21■□□□□ 0.34
RIF1-204ENST00000430328 PPIDQ08752 370 aaKnown RBP17.21■□□□□ 0.34
RIF1-204ENST00000430328 LCORLQ8N3X6 602 aa17.21■□□□□ 0.34
RIF1-204ENST00000430328 MXD3Q9BW11 206 aa17.21■□□□□ 0.34
RIF1-204ENST00000430328 PSMC3IPQ9P2W1 217 aaPredicted RBP17.21■□□□□ 0.34
RIF1-204ENST00000430328 PGM3O95394 542 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 JAK1P23458 1154 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 TNFAIP2Q03169 654 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 ALDH1A2O94788 518 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.2■□□□□ 0.34
RIF1-204ENST00000430328 GRAMD1CQ8IYS0 662 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 SLC9A7Q96T83 725 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 DKK3Q9UBP4 350 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 PCP4L1A6NKN8 68 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 NDUFB5O43674 189 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 EIF3EP60228 445 aaKnown RBP17.2■□□□□ 0.34
RIF1-204ENST00000430328 STX5Q13190 355 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 MAPK11Q15759 364 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 PFASO15067 1338 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 LCA5LO95447 670 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 GNA15P30679 374 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 QARSP47897 775 aaKnown RBP17.2■□□□□ 0.34
RIF1-204ENST00000430328 CENPLQ8N0S6 344 aaPredicted RBP17.2■□□□□ 0.34
RIF1-204ENST00000430328 DCPSQ96C86 337 aaKnown RBP17.2■□□□□ 0.34
RIF1-204ENST00000430328 PCDHGA3Q9Y5H0 932 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 PPIP5K1Q6PFW1 1433 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 FAM47E-STBD1D6RA91 191 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 RNMTO43148 476 aaKnown RBP17.2■□□□□ 0.34
RIF1-204ENST00000430328 DGKIO75912 1065 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 ALOX12P18054 663 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 CHI3L1P36222 383 aaPredicted RBP17.2■□□□□ 0.34
RIF1-204ENST00000430328 ZNF200P98182 395 aaPredicted RBP17.2■□□□□ 0.34
RIF1-204ENST00000430328 ANKMY2Q8IV38 441 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 RAB2AP61019 212 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 URGCPQ8TCY9 931 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 SLITRK2Q9H156 845 aa17.2■□□□□ 0.34
RIF1-204ENST00000430328 FGAP02671 866 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 STAT5AP42229 794 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 NUDT2P50583 147 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 STAT5BP51692 787 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 TSNQ15631 228 aaKnown RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 CYP51A1Q16850 503 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 KLHL4Q9C0H6 718 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 C3orf70A6NLC5 250 aaPredicted RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 ITGA3P26006 1051 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 C11orf96Q7Z7L8 435 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 CNPY3Q9BT09 278 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 PAIP1Q9H074 479 aaKnown RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 FLT4P35916 1363 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 ZBTB39O15060 712 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 ZCCHC18P0CG32 403 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 SERPINB8P50452 374 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 CDH6P55285 790 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 RHAGQ02094 409 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 ZNF284Q2VY69 593 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms