RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 A0A0A6YYK5 440 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 SYF2O95926 243 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 FTCDO95954 541 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 ASS1P00966 412 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 CYP2J2P51589 502 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 DMPKQ09013 629 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 CCDC58Q4VC31 144 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 TRIM67Q6ZTA4 783 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 STRA8Q7Z7C7 330 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 SPERTQ8NA61 448 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 ZC3H12CQ9C0D7 883 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 PSTPIP2Q9H939 334 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 SH3GLB2Q9NR46 395 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 TRMUO75648 421 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 APOA4P06727 396 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 RARGP13631 454 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 GPD2P43304 727 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 CYP27A1Q02318 531 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 COLGALT2Q8IYK4 626 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 ALLCQ8N6M5 410 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 FAR2Q96K12 515 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 TRIM56Q9BRZ2 755 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 MRPL1Q9BYD6 325 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 KLHL25Q9H0H3 589 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 PLAGL2Q9UPG8 496 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 PALMO75781 387 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 ABCB1P08183 1280 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 HDLBPQ00341 1268 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 CDCA2Q69YH5 1023 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 TRAF7Q6Q0C0 670 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 LEMD2Q8NC56 503 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 NOA1Q8NC60 698 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 RPS6KC1Q96S38 1066 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 CCDC59Q9P031 241 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 PHF24Q9UPV7 400 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 MYRFQ9Y2G1 1151 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 CEP170BQ9Y4F5 1589 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 MTSS1O43312 755 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 ASMTLO95671 621 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 BCL10O95999 233 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 LTKP29376 864 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 CYB5R4Q7L1T6 521 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 USTQ9Y2C2 406 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 ENPEPQ07075 957 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 RDH13Q8NBN7 331 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 NDST4Q9H3R1 872 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 TRMT6Q9UJA5 497 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 NUP98P52948 1817 aa7.9□□□□□ -1.14
SYNPO2-202ENST00000429713 VAV1P15498 845 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 CHN1P15882 459 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 CDC25AP30304 524 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 ARL4CP56559 192 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 BORAQ6PGQ7 559 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 FAM43BQ6ZT52 329 aaPredicted RBP7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 STOX1Q6ZVD7 989 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 ANKRD13BQ86YJ7 626 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 PDCD6IPQ8WUM4 868 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 RNPC3Q96LT9 517 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 MUC13Q9H3R2 512 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 TLR3O15455 904 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 IFNA16P05015 189 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 DCUN1D2Q6PH85 259 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 METTL16Q86W50 562 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 RSAD2Q8WXG1 361 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 CIDECQ96AQ7 238 aaPredicted RBP7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 DEPDC7Q96QD5 511 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 RMDN3Q96TC7 470 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 PSMC3IPQ9P2W1 217 aaPredicted RBP7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 FBXL5Q9UKA1 691 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 MYO7AQ13402 2215 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 HEG1Q9ULI3 1381 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 H0Y3Z8 333 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 CCDC33Q8N5R6 958 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 RNASE11Q8TAA1 199 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 FNIP1Q8TF40 1166 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 IGSF9Q9P2J2 1179 aa7.9□□□□□ -1.15
SYNPO2-202ENST00000429713 PRR36Q9H6K5 1346 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 ESYT2A0FGR8 921 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TTLL1O95922 423 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 GYG1P46976 350 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 RUNX1T1Q06455 604 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 DPYSQ14117 519 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 KRT73Q86Y46 540 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 RASGRP4Q8TDF6 673 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 GINS4Q9BRT9 223 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 AP1M1Q9BXS5 423 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 VPS37BQ9H9H4 285 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TLK1Q9UKI8 766 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 GNB5O14775 395 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 AFPP02771 609 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 SLC1A1P43005 524 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 BTN2A1Q7KYR7 527 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 RNF135Q8IUD6 432 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 GPHNQ9NQX3 736 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TAS2R1Q9NYW7 299 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 GLS2Q9UI32 602 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 PNMA2Q9UL42 364 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 AP3M1Q9Y2T2 418 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 BTNL10A8MVZ5 291 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 MYBL1P10243 752 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms