RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CCL15Q16663 113 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 SHROOM1Q2M3G4 852 aaPredicted RBP9.29□□□□□ -0.92
GABPB1-205ENST00000429662 ANKRD20A8PQ5CZ79 823 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 TNFAIP8L3Q5GJ75 292 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 FBXW10Q5XX13 1052 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 PCNX4Q63HM2 1172 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 ACAD10Q6JQN1 1059 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 CCDC174Q6PII3 467 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 HAUS6Q7Z4H7 955 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 DNAAF5Q86Y56 855 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 ARHGEF19Q8IW93 802 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 CCDC105Q8IYK2 499 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 ANKRD13AQ8IZ07 590 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 TDHQ8IZJ6 230 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 ZNF564Q8TBZ8 553 aaPredicted RBP9.29□□□□□ -0.92
GABPB1-205ENST00000429662 EPS8L1Q8TE68 723 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 NT5C1BQ96P26 610 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 SERPINB12Q96P63 405 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 TRIM31Q9BZY9 425 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 TMEM117Q9H0C3 514 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 EPB41L4BQ9H329 900 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 ZFYVE28Q9HCC9 887 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 AGO4Q9HCK5 861 aaKnown RBP9.29□□□□□ -0.92
GABPB1-205ENST00000429662 AVENQ9NQS1 362 aaPredicted RBP9.29□□□□□ -0.92
GABPB1-205ENST00000429662 INTS9Q9NV88 658 aaKnown RBP9.29□□□□□ -0.92
GABPB1-205ENST00000429662 TAS2R14Q9NYV8 317 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 NOCTQ9UK39 431 aaKnown RBP9.29□□□□□ -0.92
GABPB1-205ENST00000429662 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.29□□□□□ -0.92
GABPB1-205ENST00000429662 FRMPD3Q5JV73 1810 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 CFAP73A6NFT4 308 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 BTBD19C9JJ37 291 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 RIPK2O43353 540 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 TCEA3O75764 348 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 MMEP08473 750 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 CHN1P15882 459 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 CHRNB2P17787 502 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 MAGEA10P43363 369 aaPredicted RBP9.28□□□□□ -0.92
GABPB1-205ENST00000429662 RPL21P46778 160 aaKnown RBP9.28□□□□□ -0.92
GABPB1-205ENST00000429662 GCLMP48507 274 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 PSMC5P62195 406 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 KRT76Q01546 638 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 XRCC4Q13426 336 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 MOGSQ13724 837 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 VGLL4Q14135 290 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 SLC29A2Q14542 456 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 PTPROQ16827 1216 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 FAM109BQ6ICB4 259 aaPredicted RBP9.28□□□□□ -0.92
GABPB1-205ENST00000429662 KCNV1Q6PIU1 500 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 MIGA2Q7L4E1 593 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 OTUD6AQ7L8S5 288 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 PIGWQ7Z7B1 504 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 FAM83AQ86UY5 434 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 KSR1Q8IVT5 923 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 SPICE1Q8N0Z3 855 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 GBP7Q8N8V2 638 aaPredicted RBP9.28□□□□□ -0.92
GABPB1-205ENST00000429662 RDH13Q8NBN7 331 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 BANK1Q8NDB2 785 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.28□□□□□ -0.92
GABPB1-205ENST00000429662 FBXO25Q8TCJ0 367 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 SLC20A1Q8WUM9 679 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 CCT6BQ92526 530 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 GLG1Q92896 1179 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 C18orf8Q96DM3 657 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 SGSM3Q96HU1 749 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 PRMT6Q96LA8 375 aaPredicted RBP9.28□□□□□ -0.92
GABPB1-205ENST00000429662 ZNF317Q96PQ6 595 aaPredicted RBP9.28□□□□□ -0.92
GABPB1-205ENST00000429662 NUP85Q9BW27 656 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 MAF1Q9H063 256 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 RNF208Q9H0X6 261 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 KIAA1586Q9HCI6 787 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 ERVK-5Q9HDB9 667 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 SLC40A1Q9NP59 571 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 PAK6Q9NQU5 681 aaPredicted RBP9.28□□□□□ -0.92
GABPB1-205ENST00000429662 KCNH7Q9NS40 1196 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 TMOD4Q9NZQ9 345 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 WRAP73Q9P2S5 460 aaPredicted RBP9.28□□□□□ -0.92
GABPB1-205ENST00000429662 NR2E1Q9Y466 385 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 ZHX2Q9Y6X8 837 aa9.28□□□□□ -0.92
GABPB1-205ENST00000429662 VGLL3A8MV65 326 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 ZBTB39O15060 712 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 MAFGO15525 162 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 DHX15O43143 795 aaKnown RBP9.27□□□□□ -0.93
GABPB1-205ENST00000429662 GAS8O95995 478 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 SLURP2P0DP57 97 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 PYGMP11217 842 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 CYP11B1P15538 503 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 ITGB5P18084 799 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 YWHABP31946 246 aaKnown RBP9.27□□□□□ -0.93
GABPB1-205ENST00000429662 SLC8A1P32418 973 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 CETN2P41208 172 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 SCTRP47872 440 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 RTP1P59025 263 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 DLG4P78352 724 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 JAG1P78504 1218 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 FMO1Q01740 532 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 GCNT1Q02742 428 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 CENPCQ03188 943 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 RRP1BQ14684 758 aaKnown RBP9.27□□□□□ -0.93
GABPB1-205ENST00000429662 DLGAP5Q15398 846 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms