RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 TFDP1Q14186 410 aa17.32■□□□□ 0.36
MBD4-203ENST00000429544 ZNF568Q3ZCX4 644 aa17.32■□□□□ 0.36
MBD4-203ENST00000429544 MPZL3Q6UWV2 235 aa17.32■□□□□ 0.36
MBD4-203ENST00000429544 TRIM72Q6ZMU5 477 aa17.32■□□□□ 0.36
MBD4-203ENST00000429544 SLC13A5Q86YT5 568 aaPredicted RBP17.32■□□□□ 0.36
MBD4-203ENST00000429544 THNSL1Q8IYQ7 743 aa17.32■□□□□ 0.36
MBD4-203ENST00000429544 LRRC45Q96CN5 670 aa17.32■□□□□ 0.36
MBD4-203ENST00000429544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.32■□□□□ 0.36
MBD4-203ENST00000429544 CNTN6Q9UQ52 1028 aa17.32■□□□□ 0.36
MBD4-203ENST00000429544 CHRNA3P32297 505 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 ARHGAP1Q07960 439 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 UAP1Q16222 522 aaPredicted RBP17.31■□□□□ 0.36
MBD4-203ENST00000429544 ATF7IP2Q5U623 682 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 EEF1DP3Q658K8 133 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 DUPD1Q68J44 220 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 ERP44Q9BS26 406 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 RNPEPQ9H4A4 650 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 PTGIRP43119 386 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 TFAMQ00059 246 aaKnown RBP17.31■□□□□ 0.36
MBD4-203ENST00000429544 MKRN3Q13064 507 aaKnown RBP17.31■□□□□ 0.36
MBD4-203ENST00000429544 LLGL1Q15334 1064 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 LIN9Q5TKA1 542 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 TTC27Q6P3X3 843 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 TSHZ1Q6ZSZ6 1077 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 UBR7Q8N806 425 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 GPRC5AQ8NFJ5 357 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 MINDY3Q9H8M7 445 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 RASAL2Q9UJF2 1139 aa17.31■□□□□ 0.36
MBD4-203ENST00000429544 ZSWIM8A7E2V4 1837 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 LOC102724159A0A0B4J2E5 919 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 ACKR2O00590 384 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 POTEJP0CG39 1038 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 CD58P19256 250 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 PROZP22891 400 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 ACTN2P35609 894 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 PWP2Q15269 919 aaKnown RBP17.3■□□□□ 0.36
MBD4-203ENST00000429544 DUOXA2Q1HG44 320 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 CD302Q8IX05 232 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 SH2D3CQ8N5H7 860 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 CEP120Q8N960 986 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 FZD8Q9H461 694 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 ERAP1Q9NZ08 941 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 ADAM22Q9P0K1 906 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 SCN4AP35499 1836 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 C22orf31O95567 290 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 HOXC6P09630 235 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 ADORA2AP29274 412 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 MBTD1Q05BQ5 628 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 SURF1Q15526 300 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 KCTD16Q68DU8 428 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 LEKR1Q6ZMV7 388 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 MMS22LQ6ZRQ5 1243 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 EFCAB13Q8IY85 973 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 UBLCP1Q8WVY7 318 aaPredicted RBP17.3■□□□□ 0.36
MBD4-203ENST00000429544 PPP1R16BQ96T49 567 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 PTPRHQ9HD43 1115 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 MTUS1Q9ULD2 1270 aa17.3■□□□□ 0.36
MBD4-203ENST00000429544 MYO1FO00160 1098 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 PDHXO00330 501 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 LGALS2P05162 132 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 TMEM191BP0C7N4 346 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 RARAP10276 462 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 ZNF132P52740 706 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 TRPC3Q13507 836 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 ZNF792Q3KQV3 632 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 DNAJC21Q5F1R6 531 aaKnown RBP17.29■□□□□ 0.36
MBD4-203ENST00000429544 DAB2IPQ5VWQ8 1189 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 TAPT1Q6NXT6 567 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 CCDC137Q6PK04 289 aaKnown RBP17.29■□□□□ 0.36
MBD4-203ENST00000429544 SCARA5Q6ZMJ2 495 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 TMC3Q7Z5M5 1100 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 NIF3L1Q9GZT8 377 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 PCYOX1Q9UHG3 505 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 SNX24Q9Y343 169 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 CCNA1P78396 465 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 SIX1Q15475 284 aaPredicted RBP17.29■□□□□ 0.36
MBD4-203ENST00000429544 CEP85LQ5SZL2 805 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 OR2W6PQ8NHA6 318 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 GTF3C2Q8WUA4 911 aaPredicted RBP17.29■□□□□ 0.36
MBD4-203ENST00000429544 FMO2Q99518 471 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 CDT1Q9H211 546 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 SRCAPQ6ZRS2 3230 aa17.29■□□□□ 0.36
MBD4-203ENST00000429544 GLTPD2A6NH11 291 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 INSRRP14616 1297 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 DHX9Q08211 1270 aaKnown RBP17.28■□□□□ 0.36
MBD4-203ENST00000429544 ZSCAN26Q16670 478 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 PHF13Q86YI8 300 aaPredicted RBP17.28■□□□□ 0.36
MBD4-203ENST00000429544 ZNF606Q8WXB4 792 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 PROSCO94903 275 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 GJB6O95452 261 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 GH1P01241 217 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 TNNC2P02585 160 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 ZNF286BP0CG31 522 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 BRD2P25440 801 aaKnown RBP17.28■□□□□ 0.36
MBD4-203ENST00000429544 COILP38432 576 aaPredicted RBP17.28■□□□□ 0.36
MBD4-203ENST00000429544 HNRNPH2P55795 449 aaKnown RBP17.28■□□□□ 0.36
MBD4-203ENST00000429544 MTMR3Q13615 1198 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 LAMC2Q13753 1193 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 CYP1B1Q16678 543 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms