RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 MFAP3LO75121 409 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 ITGA4P13612 1032 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 CYP27A1Q02318 531 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 FAM26DQ5JW98 314 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 TAF3Q5VWG9 929 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 ALKAL1Q6UXT8 129 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 TOGARAM2Q6ZUX3 1019 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 CACNA2D4Q7Z3S7 1137 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 PHLDB2Q86SQ0 1253 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 RPAINQ86UA6 219 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 PPFIBP1Q86W92 1011 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 ECHDC2Q86YB7 292 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMEM139Q8IV31 216 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 FBXL13Q8NEE6 735 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 NEK11Q8NG66 645 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 SLC20A1Q8WUM9 679 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMEM8AQ9HCN3 771 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 ABHD10Q9NUJ1 306 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 DPP3Q9NY33 737 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 PRG3Q9Y2Y8 225 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 NME7Q9Y5B8 376 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 MICAL3Q7RTP6 2002 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZBBXA8MT70 800 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMCO5BA8MYB1 307 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 CCZ1BP86790 482 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 CCZ1P86791 482 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 PTPN11Q06124 597 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 BFSP2Q13515 415 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 DRAP1Q14919 205 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 RAD9BQ6WBX8 426 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 EHBP1Q8NDI1 1231 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 CAGE1Q8TC20 777 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 TSC1Q92574 1164 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 TWNKQ96RR1 684 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 MMS19Q96T76 1030 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 XYLT2Q9H1B5 865 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 TANC1Q9C0D5 1861 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 TLR3O15455 904 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 CYP26A1O43174 497 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 LDHAP00338 332 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 MYOGP15173 224 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 BRCC3P46736 316 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 NOP14P78316 857 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 NAB2Q15742 525 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 DUOXA2Q1HG44 320 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 LLGL2Q6P1M3 1020 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 SLC47A2Q86VL8 602 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 ACRBPQ8NEB7 543 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 PTPRSQ13332 1948 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 AKR1B15C9JRZ8 316 aaPredicted RBP10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 PITPNM1O00562 1244 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 ACAT1P24752 427 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 YARSP54577 528 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 CLDN10P78369 228 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZNF365Q70YC5 407 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZNF598Q86UK7 904 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMC2Q8TDI7 906 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 ANKRD7Q92527 254 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 RSAD1Q9HA92 442 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 ARHGAP20Q9P2F6 1191 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 APEX2Q9UBZ4 518 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 TRIM10Q9UDY6 481 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 KCNG1Q9UIX4 513 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 MTUS1Q9ULD2 1270 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 LUC7L2Q9Y383 392 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 SNX9Q9Y5X1 595 aa10.24□□□□□ -0.77
HMGCLL1-206ENST00000428842 PDCD11Q14690 1871 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 PIK3R2O00459 728 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZC3H11AO75152 810 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 TIMP1P01033 207 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 PDGFRBP09619 1106 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 KRT5P13647 590 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 TRPC3Q13507 836 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 MYBPC2Q14324 1141 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 PTPROQ16827 1216 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 DCAF4L1Q3SXM0 396 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 C9orf50Q5SZB4 431 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 WDR49Q8IV35 697 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 PASD1Q8IV76 773 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 C12orf29Q8N999 325 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 STKLD1Q8NE28 680 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 TOX2Q96NM4 488 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 SPAG5Q96R06 1193 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 DPEP3Q9H4B8 488 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 RGS18Q9NS28 235 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 KCND1Q9NSA2 647 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 CGNQ9P2M7 1197 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 ATP2C2O75185 946 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 LMO2P25791 158 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 CDC42EP1Q00587 391 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 GFPT1Q06210 699 aaPredicted RBP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZBTB6Q15916 424 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZNF699Q32M78 642 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 FOXR2Q6PJQ5 311 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMEM270Q6UE05 265 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 SLC24A5Q71RS6 500 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 HPDLQ96IR7 371 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 PPP1R10Q96QC0 940 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZSWIM1Q9BR11 485 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms