RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ENC1O14682 589 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 SRGAP2O75044 1071 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 KRT14P02533 472 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 KRT9P35527 623 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 NLRP11P59045 1033 aaKnown RBP12.21□□□□□ -0.45
CECR3-201ENST00000428828 PTPN11Q06124 597 aaPredicted RBP12.21□□□□□ -0.45
CECR3-201ENST00000428828 SNX1Q13596 522 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 MXD4Q14582 209 aaPredicted RBP12.21□□□□□ -0.45
CECR3-201ENST00000428828 TRIM60Q495X7 471 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 KLHL10Q6JEL2 608 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 SERINC5Q86VE9 423 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 NELFCDQ8IXH7 590 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 CCDC63Q8NA47 563 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 SLC43A3Q8NBI5 491 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 ATL2Q8NHH9 583 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 PIK3R5Q8WYR1 880 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 PLCB1Q9NQ66 1216 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 BAIAP2L1Q9UHR4 511 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 ATP11BQ9Y2G3 1177 aa12.21□□□□□ -0.45
CECR3-201ENST00000428828 A0A087WZ62 844 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 CCT8L1PA6NM43 557 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 CSDE1O75534 798 aaKnown RBP12.21□□□□□ -0.46
CECR3-201ENST00000428828 COL6A1P12109 1028 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 CYLC1P35663 651 aaPredicted RBP12.21□□□□□ -0.46
CECR3-201ENST00000428828 THPOP40225 353 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 NAMPTP43490 491 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 GPC3P51654 580 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 C2orf54Q08AI8 447 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 TFDP1Q14186 410 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 SETDB1Q15047 1291 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 SPRED3Q2MJR0 410 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 AGBL2Q5U5Z8 902 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 HIBCHQ6NVY1 386 aaPredicted RBP12.21□□□□□ -0.46
CECR3-201ENST00000428828 TAF2Q6P1X5 1199 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 ARHGAP22Q7Z5H3 698 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 NECAB2Q7Z6G3 386 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 FAM126BQ8IXS8 530 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 CAPZA3Q96KX2 299 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 FIZ1Q96SL8 496 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 OSMRQ99650 979 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.46
CECR3-201ENST00000428828 C17orf75Q9HAS0 396 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 OLFML3Q9NRN5 406 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 SEL1LQ9UBV2 794 aa12.21□□□□□ -0.46
CECR3-201ENST00000428828 DENND3A2RUS2 1198 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 GOLGA6L10A6NI86 522 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
CECR3-201ENST00000428828 HSPA9P38646 679 aaKnown RBP12.2□□□□□ -0.46
CECR3-201ENST00000428828 PRCPP42785 496 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 CDK7P50613 346 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 NCKAP1LP55160 1127 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 RTP1P59025 263 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 MRPS35P82673 323 aaKnown RBP12.2□□□□□ -0.46
CECR3-201ENST00000428828 CDK17Q00537 523 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 DYNC1I2Q13409 638 aaKnown RBP12.2□□□□□ -0.46
CECR3-201ENST00000428828 HSP90AA4PQ58FG1 418 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 C1QTNF12Q5T7M4 302 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 HAUS6Q7Z4H7 955 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 MAATS1Q7Z4T9 603 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 B4GALNT2Q8NHY0 566 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 DHX38Q92620 1227 aaKnown RBP12.2□□□□□ -0.46
CECR3-201ENST00000428828 ABHD8Q96I13 439 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.2□□□□□ -0.46
CECR3-201ENST00000428828 CTNNAL1Q9UBT7 734 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 ASB3Q9Y575 518 aa12.2□□□□□ -0.46
CECR3-201ENST00000428828 E7ENQ6 273 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 M0QZ92 97 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 WFS1O76024 890 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 KCNA1Q09470 495 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 PTK7Q13308 1070 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 PPP1R7Q15435 360 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 LRRC26Q2I0M4 334 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
CECR3-201ENST00000428828 KCTD16Q68DU8 428 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 ZNF720Q7Z2F6 126 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 RSPH3Q86UC2 560 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 ZBTB8OSQ8IWT0 167 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 ZNF513Q8N8E2 541 aaPredicted RBP12.19□□□□□ -0.46
CECR3-201ENST00000428828 TMEM161BQ8NDZ6 487 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 YIPF3Q9GZM5 350 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 IKZF4Q9H2S9 585 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 CNOT10Q9H9A5 744 aaKnown RBP12.19□□□□□ -0.46
CECR3-201ENST00000428828 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 ZNHIT6Q9NWK9 470 aaKnown RBP12.19□□□□□ -0.46
CECR3-201ENST00000428828 CTNND2Q9UQB3 1225 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 USP20Q9Y2K6 914 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 MROH7Q68CQ1 1323 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 CCDC85CA6NKD9 419 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 INO80B-WBP1J3KQ70 363 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 TLR3O15455 904 aaKnown RBP12.19□□□□□ -0.46
CECR3-201ENST00000428828 ASAP2O43150 1006 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 RNF8O76064 485 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 FGFR4P22455 802 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 PHKA2P46019 1235 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 STX17P56962 302 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 MRPS6P82932 125 aaKnown RBP12.19□□□□□ -0.46
CECR3-201ENST00000428828 TLE2Q04725 743 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 APBB1IPQ7Z5R6 666 aaPredicted RBP12.19□□□□□ -0.46
CECR3-201ENST00000428828 MYOCDQ8IZQ8 938 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms