RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CTXN3Q4LDR2 81 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 PRSS36Q5K4E3 855 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 RTL10Q7L3V2 364 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 TCEAL8Q8IYN2 117 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 DDX12PQ92771 950 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 AK8Q96MA6 479 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 AVENQ9NQS1 362 aaPredicted RBP16.93■□□□□ 0.3
SEC13-210ENST00000428626 LARSQ9P2J5 1176 aaKnown RBP16.93■□□□□ 0.3
SEC13-210ENST00000428626 TBX20Q9UMR3 447 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 MRPS23Q9Y3D9 190 aaKnown RBP16.93■□□□□ 0.3
SEC13-210ENST00000428626 MTF2Q9Y483 593 aaPredicted RBP16.93■□□□□ 0.3
SEC13-210ENST00000428626 TIMM13Q9Y5L4 95 aaPredicted RBP16.93■□□□□ 0.3
SEC13-210ENST00000428626 SHISA7A6NL88 538 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 LACTBL1A8MY62 500 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 CLTAP09496 248 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 LRPAP1P30533 357 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 SF3A1Q15459 793 aaKnown RBP16.92■□□□□ 0.3
SEC13-210ENST00000428626 ENOX2Q16206 610 aaKnown RBP16.92■□□□□ 0.3
SEC13-210ENST00000428626 USP49Q70CQ1 688 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 MTSS1LQ765P7 747 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 PJA1Q8NG27 643 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 RAD54LQ92698 747 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 KIF12Q96FN5 646 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 CORO1BQ9BR76 489 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 DDX23Q9BUQ8 820 aaKnown RBP16.92■□□□□ 0.3
SEC13-210ENST00000428626 IKZF4Q9H2S9 585 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 CYP4F11Q9HBI6 524 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 ODF2LQ9ULJ1 636 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 PCDHB8Q9UN66 801 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 SIT1Q9Y3P8 196 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 INSL5Q9Y5Q6 135 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 ZNF292O60281 2723 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 F5P12259 2224 aa16.92■□□□□ 0.3
SEC13-210ENST00000428626 ANK1P16157 1881 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 GPR179Q6PRD1 2367 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 TISP43B9A030 160 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 H7C4K7 107 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 M0QZQ0 153 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 PRRG1O14668 218 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 MOSPD3O75425 235 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 PIGRP01833 764 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 LRG1P02750 347 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 ADRB2P07550 413 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 OR4Q2P0C623 313 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 PTPN2P17706 415 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 RFX1P22670 979 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 FCARP24071 287 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 NMT1P30419 496 aaKnown RBP16.91■□□□□ 0.3
SEC13-210ENST00000428626 UBA7P41226 1012 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 MATR3P43243 847 aaKnown RBP eCLIP16.91■□□□□ 0.3
SEC13-210ENST00000428626 AARSP49588 968 aaKnown RBP eCLIP16.91■□□□□ 0.3
SEC13-210ENST00000428626 MCM2P49736 904 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 TANGO2Q6ICL3 276 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 RNF19BQ6ZMZ0 732 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 HS6ST3Q8IZP7 471 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 MYCT1Q8N699 235 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 NKD2Q969F2 451 aaPredicted RBP16.91■□□□□ 0.3
SEC13-210ENST00000428626 BICD1Q96G01 975 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 CRISPLD1Q9H336 500 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 PLEKHA5Q9HAU0 1116 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 CEP72Q9P209 647 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 KCNG1Q9UIX4 513 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 MIA3Q5JRA6 1907 aa16.91■□□□□ 0.3
SEC13-210ENST00000428626 K7ENM7 598 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 HNRNPDLO14979 420 aaKnown RBP16.9■□□□□ 0.3
SEC13-210ENST00000428626 SLC26A4O43511 780 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 CD72P21854 359 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 ELF1P32519 619 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 LIG4P49917 911 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 ADCY1Q08828 1119 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 CUL4AQ13619 759 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 PTPAQ15257 358 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 MLF2Q15773 248 aaPredicted RBP16.9■□□□□ 0.3
SEC13-210ENST00000428626 SLC44A4Q53GD3 710 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 TPGS2Q68CL5 300 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 ZNF280DQ6N043 979 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 MAML2Q8IZL2 1156 aaPredicted RBP16.9■□□□□ 0.3
SEC13-210ENST00000428626 BEST2Q8NFU1 509 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 CALML4Q96GE6 196 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 EPSTI1Q96J88 318 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 ZSWIM3Q96MP5 696 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 PARVGQ9HBI0 331 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.9■□□□□ 0.3
SEC13-210ENST00000428626 CLIC4Q9Y696 253 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 R4GN57 208 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 FANCMQ8IYD8 2048 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 NCANO14594 1321 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 OTOGLQ3ZCN5 2332 aa16.9■□□□□ 0.3
SEC13-210ENST00000428626 SCN1AP35498 2009 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 A0A0B4J269 797 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 ANKRD63C9JTQ0 380 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 SPTLC1O15269 473 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 OGTO15294 1046 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 TRAK2O60296 914 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 ECI2O75521 394 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 FAM13AO94988 1023 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 OAZ2O95190 189 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 GJA1P17302 382 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 LONP1P36776 959 aaKnown RBP16.89■□□□□ 0.29
SEC13-210ENST00000428626 ZC2HC1CQ53FD0 456 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms