RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 CLUL1Q15846 466 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 C9orf57Q5W0N0 161 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 TTPALQ9BTX7 342 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 PDCL3Q9H2J4 239 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 DMAC2Q9NW81 257 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 FRMD4BQ9Y2L6 1034 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 MUC3AQ02505 3323 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 AKAP3O75969 853 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 CNPP09543 421 aaKnown RBP13.55□□□□□ -0.24
SMIM12-203ENST00000426886 CYP3A5P20815 502 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 KCNA5P22460 613 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 KLRC2P26717 231 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 POLR2BP30876 1174 aaKnown RBP13.55□□□□□ -0.24
SMIM12-203ENST00000426886 DLX2Q07687 328 aaPredicted RBP13.55□□□□□ -0.24
SMIM12-203ENST00000426886 STIM1Q13586 685 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 PALB2Q86YC2 1186 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 C12orf56Q8IXR9 622 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 C1orf127Q8N9H9 656 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 PLEKHO2Q8TD55 490 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 CACTINQ8WUQ7 758 aaKnown RBP13.55□□□□□ -0.24
SMIM12-203ENST00000426886 AGAP1Q9UPQ3 857 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 PPP1R3GB7ZBB8 358 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 SPTLC1O15269 473 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 TRAPPC3O43617 180 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 CLSTN1O94985 981 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 SPATA31D3P0C874 917 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 LRPAP1P30533 357 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 DLG4P78352 724 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 KIAA0319Q5VV43 1072 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 DSTYKQ6XUX3 929 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 SPATA31D4Q6ZUB0 917 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 APOL5Q9BWW9 433 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 MMRN2Q9H8L6 949 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 CHST7Q9NS84 486 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 INTS13Q9NVM9 706 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 CTNND2Q9UQB3 1225 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 DERAQ9Y315 318 aa13.55□□□□□ -0.24
SMIM12-203ENST00000426886 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 PSMA7O14818 248 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 TEX28O15482 410 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 LILRA4P59901 499 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 DSG1Q02413 1049 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 DUOXA2Q1HG44 320 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 ZCWPW2Q504Y3 356 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 CENPPQ6IPU0 288 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 PDE12Q6L8Q7 609 aaKnown RBP13.54□□□□□ -0.24
SMIM12-203ENST00000426886 RNF168Q8IYW5 571 aaPredicted RBP13.54□□□□□ -0.24
SMIM12-203ENST00000426886 HLA-CQ95604 372 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 ANKRD36BP1Q96IX9 119 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 TSG101Q99816 390 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 HERC2P3Q9BVR0 1158 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 BARX2Q9UMQ3 279 aaPredicted RBP13.54□□□□□ -0.24
SMIM12-203ENST00000426886 PIRO00625 290 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 EFEMP2O95967 443 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 RPL13P26373 211 aaKnown RBP13.54□□□□□ -0.24
SMIM12-203ENST00000426886 NDUFV1P49821 464 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 POU5F1Q01860 360 aaKnown RBP13.54□□□□□ -0.24
SMIM12-203ENST00000426886 PSMD6Q15008 389 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 SLC9A9Q8IVB4 645 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 NELFBQ8WX92 580 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 ELMO3Q96BJ8 720 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 MFSD14AQ96MC6 490 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 GZF1Q9H116 711 aaPredicted RBP13.54□□□□□ -0.24
SMIM12-203ENST00000426886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMIM12-203ENST00000426886 R3HCC1Q9Y3T6 440 aaKnown RBP13.54□□□□□ -0.24
SMIM12-203ENST00000426886 HCFC2Q9Y5Z7 792 aa13.54□□□□□ -0.24
SMIM12-203ENST00000426886 TMEM189-UBE2V1I3L0A0 370 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 CLASP2O75122 1294 aaKnown RBP13.53□□□□□ -0.24
SMIM12-203ENST00000426886 TNNC2P02585 160 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 ARPP19P56211 112 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 ELAVL2Q12926 359 aaKnown RBP13.53□□□□□ -0.24
SMIM12-203ENST00000426886 DUSP6Q16828 381 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 FAM186BQ8IYM0 893 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 VN1R2Q8NFZ6 395 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 ZNF516Q92618 1163 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 KLHL5Q96PQ7 755 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 EMILIN2Q9BXX0 1053 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 PRDM4Q9UKN5 801 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 CETN3O15182 167 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 LILRB3O75022 631 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 CST3P01034 146 aaPredicted RBP13.53□□□□□ -0.24
SMIM12-203ENST00000426886 TRIM49P0CI25 452 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 TRIM49CP0CI26 452 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 EPCAMP16422 314 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 CCNE1P24864 410 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 BIRC3Q13489 604 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 SURF1Q15526 300 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 PSMD5Q16401 504 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 TRAPPC11Q7Z392 1133 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 LNX1Q8TBB1 728 aaPredicted RBP13.53□□□□□ -0.24
SMIM12-203ENST00000426886 PARD3BQ8TEW8 1205 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 UBE2ZQ9H832 354 aaPredicted RBP13.53□□□□□ -0.24
SMIM12-203ENST00000426886 SIX4Q9UIU6 781 aa13.53□□□□□ -0.24
SMIM12-203ENST00000426886 ANO9A1A5B4 782 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 LRRIQ3A6PVS8 624 aaPredicted RBP13.52□□□□□ -0.24
SMIM12-203ENST00000426886 ADAM12O43184 909 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 SLC34A2O95436 690 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 GLP2RO95838 553 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 FGFR3P22607 806 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms