RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 PDLIM2Q96JY6 352 aa14.64□□□□□ -0.07
RPL28-202ENST00000426763 NOL3O60936 208 aaKnown RBP14.64□□□□□ -0.07
RPL28-202ENST00000426763 DHX34Q14147 1143 aaKnown RBP14.64□□□□□ -0.07
RPL28-202ENST00000426763 NOP9Q86U38 636 aaKnown RBP14.64□□□□□ -0.07
RPL28-202ENST00000426763 ZC3H18Q86VM9 953 aaKnown RBP14.64□□□□□ -0.07
RPL28-202ENST00000426763 UBA3Q8TBC4 463 aa14.64□□□□□ -0.07
RPL28-202ENST00000426763 TMC2Q8TDI7 906 aa14.64□□□□□ -0.07
RPL28-202ENST00000426763 HMX1Q9NP08 348 aaPredicted RBP14.64□□□□□ -0.07
RPL28-202ENST00000426763 ATP11BQ9Y2G3 1177 aa14.64□□□□□ -0.07
RPL28-202ENST00000426763 PARP4Q9UKK3 1724 aaKnown RBP14.63□□□□□ -0.07
RPL28-202ENST00000426763 HMBSP08397 361 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 RGMBQ6NW40 437 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 TAF2Q6P1X5 1199 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 C1orf54Q8WWF1 131 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 CPB2Q96IY4 423 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 OSMRQ99650 979 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 CBWD1Q9BRT8 395 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 MTMR12Q9C0I1 747 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 TRIM17Q9Y577 477 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 CYTH3O43739 400 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 ZC3H11AO75152 810 aaKnown RBP eCLIP14.63□□□□□ -0.07
RPL28-202ENST00000426763 CASP8Q14790 479 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 OLFML3Q9NRN5 406 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 HDAC6Q9UBN7 1215 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 SHPRHQ149N8 1683 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 TMEM253P0C7T8 217 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 BRD2P25440 801 aaKnown RBP14.63□□□□□ -0.07
RPL28-202ENST00000426763 ATP1A1P05023 1023 aaKnown RBP14.63□□□□□ -0.07
RPL28-202ENST00000426763 DRP2Q13474 957 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 MYBPC2Q14324 1141 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 CEP120Q8N960 986 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 TMEM117Q9H0C3 514 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 VCX3BQ9H321 246 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.63□□□□□ -0.073e-6■■■■□ 25.1
RPL28-202ENST00000426763 KIAA1257Q9ULG3 409 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 SH3BP1Q9Y3L3 701 aa14.63□□□□□ -0.07
RPL28-202ENST00000426763 MX2P20592 715 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 GPD1P21695 349 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 RARRES1P49788 294 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 CHEK2O96017 543 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 THP07101 528 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 MYPNQ86TC9 1320 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 LRG1P02750 347 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 RAB27AP51159 221 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 ST8SIA6P61647 398 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 TDRD10Q5VZ19 366 aaKnown RBP14.62□□□□□ -0.07
RPL28-202ENST00000426763 SLC7A14Q8TBB6 771 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 ABI2Q9NYB9 513 aaPredicted RBP14.62□□□□□ -0.07
RPL28-202ENST00000426763 NAGPAQ9UK23 515 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 HMGB1P1B2RPK0 211 aaPredicted RBP14.62□□□□□ -0.07
RPL28-202ENST00000426763 F5H423 210 aaPredicted RBP14.62□□□□□ -0.07
RPL28-202ENST00000426763 EEF2KO00418 725 aaKnown RBP14.62□□□□□ -0.07
RPL28-202ENST00000426763 CCT5P48643 541 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 PSEN2P49810 448 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 PRAMEP78395 509 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 ZKSCAN8Q15776 578 aaPredicted RBP14.62□□□□□ -0.07
RPL28-202ENST00000426763 FSCN1Q16658 493 aaKnown RBP14.62□□□□□ -0.07
RPL28-202ENST00000426763 DEFB115Q30KQ5 88 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 ANO4Q32M45 955 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 ATG16L1Q676U5 607 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 FRA10AC1Q70Z53 315 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 WDR49Q8IV35 697 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 ATL2Q8NHH9 583 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 PLAAQ9Y263 795 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 BCL9LQ86UU0 1499 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 SLITRK3O94933 977 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 KLK7P49862 253 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 NR1H3Q13133 447 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 LRP10Q7Z4F1 713 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 EFHBQ8N7U6 833 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 CCDC197Q8NCU1 140 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 ASAP3Q8TDY4 903 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 RMDN1Q96DB5 314 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 SYT17Q9BSW7 474 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 NUF2Q9BZD4 464 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 KLHL11Q9NVR0 708 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 DSEQ9UL01 958 aa14.62□□□□□ -0.07
RPL28-202ENST00000426763 ABCC6O95255 1503 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 SLC15A5A6NIM6 579 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 PI4K2BG5E9Z4 385 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 COPEO14579 308 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 GRAP2O75791 330 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 GYPCP04921 128 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 CLCN6P51797 869 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 ARHGAP15Q53QZ3 475 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 TTC19Q6DKK2 380 aaPredicted RBP14.61□□□□□ -0.07
RPL28-202ENST00000426763 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
RPL28-202ENST00000426763 ABCF3Q9NUQ8 709 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 YY1P25490 414 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 ADCYAP1R1P41586 468 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 PSMC6P62333 389 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 DCAF6Q58WW2 860 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 IZUMO3Q5VZ72 239 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 TRIM65Q6PJ69 517 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 ATPAF2Q8N5M1 289 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 SCFD1Q8WVM8 642 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 DNAJB3Q8WWF6 145 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 IRAK4Q9NWZ3 460 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 USP27XA6NNY8 438 aa14.61□□□□□ -0.07
RPL28-202ENST00000426763 AP3B1O00203 1094 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms