RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 NUB1Q9Y5A7 615 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 FAM237AA0A1B0GTK4 181 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 TRIOO75962 3097 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 LRPAP1P30533 357 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 RPL9P32969 192 aaKnown RBP14.79□□□□□ -0.04
SNX3-204ENST00000426155 SYKP43405 635 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 NUCB2P80303 420 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 ITIH3Q06033 890 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 TMEM132DQ14C87 1099 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 VARS2Q5ST30 1063 aaKnown RBP14.79□□□□□ -0.04
SNX3-204ENST00000426155 CES5AQ6NT32 575 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 ARMCX5Q6P1M9 558 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 LILRA6Q6PI73 481 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 SCFD1Q8WVM8 642 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 PHF7Q9BWX1 381 aaPredicted RBP14.79□□□□□ -0.04
SNX3-204ENST00000426155 EPHX3Q9H6B9 360 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 TMEM206Q9H813 350 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 MTRRQ9UBK8 725 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 CDY1Q9Y6F8 540 aa14.79□□□□□ -0.04
SNX3-204ENST00000426155 A0A1W2PQ27 194 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 A0A1W2PQ64 194 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 A0A1W2PQD8 194 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 LOC730098B7Z3J9 87 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 TRAPPC3O43617 180 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 CYP3A5P20815 502 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 GARTP22102 1010 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 OR1D2P34982 312 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 CREMQ03060 361 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 POSTNQ15063 836 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 SPATA1Q5VX52 437 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 SCARA3Q6AZY7 606 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 BRSK2Q8IWQ3 736 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 GPR65Q8IYL9 337 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 SUSD3Q96L08 255 aa14.78□□□□□ -0.04
SNX3-204ENST00000426155 PYM1Q9BRP8 204 aaKnown RBP14.78□□□□□ -0.04
SNX3-204ENST00000426155 RBAKQ9NYW8 714 aaPredicted RBP14.78□□□□□ -0.04
SNX3-204ENST00000426155 TIMM13Q9Y5L4 95 aaPredicted RBP14.78□□□□□ -0.04
SNX3-204ENST00000426155 DOCK8Q8NF50 2099 aa14.77□□□□□ -0.04
SNX3-204ENST00000426155 CCDC195A0A1B0GUA6 201 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 SPTLC1O15269 473 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 EIF3DO15371 548 aaKnown RBP eCLIP14.77□□□□□ -0.05
SNX3-204ENST00000426155 TGFB1I1O43294 461 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 KMT5BQ4FZB7 885 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 C9orf57Q5W0N0 161 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 LMBRD2Q68DH5 695 aaPredicted RBP14.77□□□□□ -0.05
SNX3-204ENST00000426155 STXBP4Q6ZWJ1 553 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 GPR149Q86SP6 731 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 CBWD2Q8IUF1 395 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 CD302Q8IX05 232 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 KIAA0895Q8NCT3 520 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 KREMEN2Q8NCW0 462 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 BEST2Q8NFU1 509 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 ZNF507Q8TCN5 953 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 ZNF707Q96C28 371 aaPredicted RBP14.77□□□□□ -0.05
SNX3-204ENST00000426155 POP1Q99575 1024 aaKnown RBP14.77□□□□□ -0.05
SNX3-204ENST00000426155 ASB7Q9H672 318 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 AGPAT3Q9NRZ7 376 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 MUTYHQ9UIF7 546 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 FBXW11Q9UKB1 542 aa14.77□□□□□ -0.05
SNX3-204ENST00000426155 PTPRJQ12913 1337 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 PVALEFA0A1B0GWK0 134 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 C2CD4DB7Z1M9 353 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 CLIC2O15247 247 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 XPOTO43592 962 aaKnown RBP14.76□□□□□ -0.05
SNX3-204ENST00000426155 EXTL3O43909 919 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 MTHFRP42898 656 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 ARPP19P56211 112 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 ROR1Q01973 937 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 STK4Q13043 487 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 PDXDC1Q6P996 788 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 KRBA2Q6ZNG9 492 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 ANKS3Q6ZW76 656 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 RNF135Q8IUD6 432 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 GPD1LQ8N335 351 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 RIPOR3Q96MK2 946 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 PDE11AQ9HCR9 933 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 EXOC1Q9NV70 894 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 HSPBP1Q9NZL4 362 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 PCDHB8Q9UN66 801 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 DERAQ9Y315 318 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 C2CD2Q9Y426 696 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 BACE2Q9Y5Z0 518 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 NOTCH4Q99466 2003 aa14.76□□□□□ -0.05
SNX3-204ENST00000426155 MYO10Q9HD67 2058 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 UBE4BO95155 1302 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 ANO9A1A5B4 782 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 WDR27A2RRH5 827 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 FAM86C2PA6NEL3 165 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 M0QZQ0 153 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 PIRO00625 290 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 SYN3O14994 580 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 ZNF202O95125 648 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 IL18RAPO95256 599 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 RPN1P04843 607 aaKnown RBP14.75□□□□□ -0.05
SNX3-204ENST00000426155 C8AP07357 584 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 AARSP49588 968 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNX3-204ENST00000426155 CYP2J2P51589 502 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 TFAMQ00059 246 aaKnown RBP14.75□□□□□ -0.05
SNX3-204ENST00000426155 RAB33AQ14088 237 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 MRPL58Q14197 206 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms