RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 LRFN2Q9ULH4 789 aa7.68□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PLAGL2Q9UPG8 496 aa7.68□□□□□ -1.18
CHCHD3P1-201ENST00000425516 YBX2Q9Y2T7 364 aaKnown RBP7.68□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PCDHA11Q9Y5I1 949 aa7.68□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SMIM28A0A1B0GU29 152 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZNF233A6NK53 670 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 AKAP3O75969 853 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 DDHD2O94830 711 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CXCL8P10145 99 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MYOGP15173 224 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 IBSPP21815 317 aaPredicted RBP7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NR2F2P24468 414 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ERCC5P28715 1186 aaPredicted RBP7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MLH1P40692 756 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SCNN1GP51170 649 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 STX17P56962 302 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CLDN10P78369 228 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SMAD3P84022 425 aaKnown RBP7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 FKBP3Q00688 224 aaKnown RBP7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CYP24A1Q07973 514 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 DSC1Q08554 894 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PAK1Q13153 545 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ADAM9Q13443 819 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 STX1AQ16623 288 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NOMO2Q5JPE7 1267 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 C1orf220Q5T0J3 134 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 KLHL10Q6JEL2 608 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 FAM117BQ6P1L5 589 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SASS6Q6UVJ0 657 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 GLB1LQ6UWU2 654 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 FILIP1Q7Z7B0 1213 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZNF280BQ86YH2 543 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 IRF2BP1Q8IU81 584 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ARMC2Q8NEN0 867 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ARHGAP9Q9BRR9 750 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PBX4Q9BYU1 374 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NRDE2Q9H7Z3 1164 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 RPF1Q9H9Y2 349 aaKnown RBP7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TBC1D13Q9NVG8 400 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ANO10Q9NW15 660 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CTNND2Q9UQB3 1225 aa7.67□□□□□ -1.18
CHCHD3P1-201ENST00000425516 FNDC1Q4ZHG4 1894 aaPredicted RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CHD7Q9P2D1 2997 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 BICDL2A1A5D9 508 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SYCE3A1L190 88 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 LINC01553A4QN01 128 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TBKBP1A7MCY6 615 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 EXOC3O60645 756 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 IL18RAPO95256 599 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 POMCP01189 267 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 THP07101 528 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 RPL13P26373 211 aaKnown RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 YARSP54577 528 aaKnown RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MARSP56192 900 aaKnown RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SOX4Q06945 474 aaPredicted RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ENPEPQ07075 957 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 BTG3Q14201 252 aaPredicted RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NCAPHQ15003 741 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PSMD6Q15008 389 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SNRNP35Q16560 246 aaKnown RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PAN2Q504Q3 1202 aaKnown RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SCARA3Q6AZY7 606 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 JADE1Q6IE81 842 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SPRED2Q7Z698 418 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CD302Q8IX05 232 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 EFCAB13Q8IY85 973 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 COLGALT2Q8IYK4 626 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TMEM130Q8N3G9 435 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CXorf38Q8TB03 319 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ENOX1Q8TC92 643 aaKnown RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PARD3BQ8TEW8 1205 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 EEF2KMTQ96G04 330 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CEP63Q96MT8 703 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TSPAN18Q96SJ8 248 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 YME1L1Q96TA2 773 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TSG101Q99816 390 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 BPIFA3Q9BQP9 254 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MKNK1Q9BUB5 465 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SRRTQ9BXP5 876 aaKnown RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 DNAJC25Q9H1X3 360 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ASB7Q9H672 318 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PDE11AQ9HCR9 933 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TOPORSQ9NS56 1045 aaPredicted RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 RBAKQ9NYW8 714 aaPredicted RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 KANSL3Q9P2N6 904 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 DNAJB4Q9UDY4 337 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 DERAQ9Y315 318 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MRPL42Q9Y6G3 142 aaKnown RBP7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PTPRJQ12913 1337 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 LAMA3Q16787 3333 aa7.66□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ANO9A1A5B4 782 aa7.65□□□□□ -1.18
CHCHD3P1-201ENST00000425516 LRRIQ3A6PVS8 624 aaPredicted RBP7.65□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CETN3O15182 167 aa7.65□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SLC16A3O15427 465 aaKnown RBP7.65□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZIC2O95409 532 aaPredicted RBP7.65□□□□□ -1.18
CHCHD3P1-201ENST00000425516 EFEMP2O95967 443 aa7.65□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CA3P07451 260 aa7.65□□□□□ -1.18
CHCHD3P1-201ENST00000425516 GALTP07902 379 aa7.65□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NFICP08651 508 aa7.65□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CCDC192P0DO97 292 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms