RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 DNM3Q9UQ16 869 aa19.23■□□□□ 0.67
HDAC7-208ENST00000425451 RBM19Q9Y4C8 960 aaKnown RBP19.23■□□□□ 0.67
HDAC7-208ENST00000425451 PCDHB6Q9Y5E3 794 aa19.23■□□□□ 0.67
HDAC7-208ENST00000425451 NCAM2O15394 837 aa19.22■□□□□ 0.67
HDAC7-208ENST00000425451 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.67
HDAC7-208ENST00000425451 CDC25AP30304 524 aa19.22■□□□□ 0.67
HDAC7-208ENST00000425451 MTAPQ13126 283 aa19.22■□□□□ 0.67
HDAC7-208ENST00000425451 DMP1Q13316 513 aaPredicted RBP19.22■□□□□ 0.67
HDAC7-208ENST00000425451 SLC10A6Q3KNW5 377 aa19.22■□□□□ 0.67
HDAC7-208ENST00000425451 CTXN3Q4LDR2 81 aa19.22■□□□□ 0.67
HDAC7-208ENST00000425451 HS6ST3Q8IZP7 471 aa19.22■□□□□ 0.67
HDAC7-208ENST00000425451 TCHPQ9BT92 498 aa19.22■□□□□ 0.67
HDAC7-208ENST00000425451 MMTAG2Q9BU76 263 aaKnown RBP19.22■□□□□ 0.67
HDAC7-208ENST00000425451 EPC1Q9H2F5 836 aa19.22■□□□□ 0.67
HDAC7-208ENST00000425451 MRPS17Q9Y2R5 130 aaKnown RBP19.22■□□□□ 0.67
HDAC7-208ENST00000425451 NUB1Q9Y5A7 615 aa19.22■□□□□ 0.67
HDAC7-208ENST00000425451 SFI1A8K8P3 1242 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 ZNF197O14709 1029 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 SLC16A4O15374 487 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 COL4A2P08572 1712 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 RSPO4Q2I0M5 234 aaPredicted RBP19.21■□□□□ 0.67
HDAC7-208ENST00000425451 SEZ6Q53EL9 994 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 MAP4K3Q8IVH8 894 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 TMEM130Q8N3G9 435 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 DDX12PQ92771 950 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 DRC1Q96MC2 740 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 TBC1D32Q96NH3 1257 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 TRMT61BQ9BVS5 477 aaKnown RBP19.21■□□□□ 0.67
HDAC7-208ENST00000425451 BRD9Q9H8M2 597 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 C17orf75Q9HAS0 396 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 NCDNQ9UBB6 729 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 NOL7Q9UMY1 257 aaKnown RBP19.21■□□□□ 0.67
HDAC7-208ENST00000425451 STK24Q9Y6E0 443 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 F5P12259 2224 aa19.21■□□□□ 0.67
HDAC7-208ENST00000425451 TDGF1P13385 188 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 EPHA5P54756 1037 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 GNL2Q13823 731 aaKnown RBP19.2■□□□□ 0.66
HDAC7-208ENST00000425451 KRT79Q5XKE5 535 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 VITQ6UXI7 678 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 RNF19BQ6ZMZ0 732 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 MAMSTRQ6ZN01 415 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 PDZD4Q76G19 769 aaPredicted RBP19.2■□□□□ 0.66
HDAC7-208ENST00000425451 SMARCD2Q92925 531 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 RAB34Q9BZG1 259 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 ZNF334Q9HCZ1 680 aaPredicted RBP19.2■□□□□ 0.66
HDAC7-208ENST00000425451 TRPV5Q9NQA5 729 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 TUBGCP4Q9UGJ1 667 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 AFF4Q9UHB7 1163 aaKnown RBP19.2■□□□□ 0.66
HDAC7-208ENST00000425451 SMG5Q9UPR3 1016 aaKnown RBP19.2■□□□□ 0.66
HDAC7-208ENST00000425451 CITO14578 2027 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 NCANO14594 1321 aa19.2■□□□□ 0.66
HDAC7-208ENST00000425451 MAN2B1O00754 1011 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 TOM1L1O75674 476 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 HARSP12081 509 aaKnown RBP19.19■□□□□ 0.66
HDAC7-208ENST00000425451 GJA1P17302 382 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 TGM1P22735 817 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 MCM4P33991 863 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 HMGN5P82970 282 aaKnown RBP19.19■□□□□ 0.66
HDAC7-208ENST00000425451 TWF1Q12792 350 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 CYP4A22Q5TCH4 519 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 ZNF280DQ6N043 979 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 TMEM161BQ8NDZ6 487 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 SPIRE2Q8WWL2 714 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 IRF7Q92985 503 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 ZNF512Q96ME7 567 aaPredicted RBP19.19■□□□□ 0.66
HDAC7-208ENST00000425451 CHRDQ9H2X0 955 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 TRPV4Q9HBA0 871 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 MAFFQ9ULX9 164 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 NDRG2Q9UN36 371 aaKnown RBP19.19■□□□□ 0.66
HDAC7-208ENST00000425451 PCDHB8Q9UN66 801 aa19.19■□□□□ 0.66
HDAC7-208ENST00000425451 VNN2O95498 520 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 PSMC3P17980 439 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 GUCY2CP25092 1073 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 GDI1P31150 447 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 PRPHP41219 470 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 VIPR2P41587 438 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 IQCEQ6IPM2 695 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 APPL2Q8NEU8 664 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 BEST2Q8NFU1 509 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 LRRC3Q9BY71 257 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 FAM126AQ9BYI3 521 aaPredicted RBP19.18■□□□□ 0.66
HDAC7-208ENST00000425451 HAPLN2Q9GZV7 340 aa19.18■□□□□ 0.66
HDAC7-208ENST00000425451 PDCD11Q14690 1871 aaKnown RBP19.18■□□□□ 0.66
HDAC7-208ENST00000425451 M0QZQ0 153 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 ARNTLO00327 626 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 LAD1O00515 517 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 OAZ2O95190 189 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 MAPTP10636 758 aaKnown RBP19.17■□□□□ 0.66
HDAC7-208ENST00000425451 MYL4P12829 197 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 PLS3P13797 630 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 RAD51AP2Q09MP3 1159 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 NOLC1Q14978 699 aaKnown RBP eCLIP19.17■□□□□ 0.66
HDAC7-208ENST00000425451 ZBTB6Q15916 424 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 ELMOD1Q8N336 334 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 GPR161Q8N6U8 529 aaKnown RBP19.17■□□□□ 0.66
HDAC7-208ENST00000425451 FAM184AQ8NB25 1140 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 ZSCAN18Q8TBC5 510 aaPredicted RBP19.17■□□□□ 0.66
HDAC7-208ENST00000425451 FAM3CQ92520 227 aa19.17■□□□□ 0.66
HDAC7-208ENST00000425451 ZSCAN31Q96LW9 406 aaPredicted RBP19.17■□□□□ 0.66
HDAC7-208ENST00000425451 PNMA5Q96PV4 448 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms