RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CEP290O15078 2479 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 OFD1O75665 1012 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 CLSTN1O94985 981 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 VNN1O95497 513 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 ITGB3P05106 788 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 NFICP08651 508 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 SKILP12757 684 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 WNT7BP56706 349 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 MYL6P60660 151 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 LRMPQ12912 555 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 RAPGEF1Q13905 1077 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 DRAP1Q14919 205 aaPredicted RBP11.1□□□□□ -0.63
MDC1-205ENST00000425072 ZNF667Q5HYK9 610 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 IQCEQ6IPM2 695 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 PDXDC1Q6P996 788 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 DEFB128Q7Z7B8 93 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 ABI1Q8IZP0 508 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 LRRC52Q8N7C0 313 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 C1orf127Q8N9H9 656 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 RNF169Q8NCN4 708 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 URGCPQ8TCY9 931 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 BAP1Q92560 729 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 TATDN2Q93075 761 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 HPDLQ96IR7 371 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 UROC1Q96N76 676 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 ZMAT2Q96NC0 199 aaKnown RBP11.1□□□□□ -0.63
MDC1-205ENST00000425072 FAM193BQ96PV7 902 aaPredicted RBP11.1□□□□□ -0.63
MDC1-205ENST00000425072 GAD1Q99259 594 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 GANQ9H2C0 597 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 VRTNQ9H8Y1 702 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 CYP3A43Q9HB55 503 aa11.1□□□□□ -0.63
MDC1-205ENST00000425072 PTPRJQ12913 1337 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 UMODL1Q5DID0 1318 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 TRIM43BA6NCK2 446 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
MDC1-205ENST00000425072 PIRO00625 290 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 INPPL1O15357 1258 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 ARHGAP6O43182 974 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 SERPING1P05155 500 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 LRPAP1P30533 357 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 SOX5P35711 763 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
MDC1-205ENST00000425072 ARHGAP44Q17R89 818 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 ZNF699Q32M78 642 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 WDR72Q3MJ13 1102 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 VPS36Q86VN1 386 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 CCDC170Q8IYT3 715 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 HELQQ8TDG4 1101 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 LPPQ93052 612 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 TRIM43Q96BQ3 446 aaPredicted RBP11.09□□□□□ -0.63
MDC1-205ENST00000425072 ZNF560Q96MR9 790 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 PPP1R10Q96QC0 940 aaKnown RBP11.09□□□□□ -0.63
MDC1-205ENST00000425072 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 FHOD1Q9Y613 1164 aa11.09□□□□□ -0.63
MDC1-205ENST00000425072 TTC3P53804 2025 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 ANO9A1A5B4 782 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 ARHGEF37A1IGU5 675 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 LRRC53A6NM62 1247 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 FOXN3O00409 490 aaPredicted RBP11.08□□□□□ -0.64
MDC1-205ENST00000425072 EPHB6O15197 1021 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 MEFVO15553 781 aaPredicted RBP11.08□□□□□ -0.64
MDC1-205ENST00000425072 IPO7O95373 1038 aaKnown RBP11.08□□□□□ -0.64
MDC1-205ENST00000425072 ALDH2P05091 517 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 ANXA13P27216 316 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 POLR2BP30876 1174 aaKnown RBP11.08□□□□□ -0.64
MDC1-205ENST00000425072 CYLC1P35663 651 aaPredicted RBP11.08□□□□□ -0.64
MDC1-205ENST00000425072 JAM2P57087 298 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 TNNC1P63316 161 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 GRIK3Q13003 919 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 PPIGQ13427 754 aaKnown RBP eCLIP11.08□□□□□ -0.64
MDC1-205ENST00000425072 TUSC3Q13454 348 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 CUL2Q13617 745 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 ASIC2Q16515 512 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 MEA1Q16626 185 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 NOMO2Q5JPE7 1267 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 C9orf57Q5W0N0 161 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 DCLRE1AQ6PJP8 1040 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 DPH6Q7L8W6 267 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 IRF2BP2Q7Z5L9 587 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 NPAS4Q8IUM7 802 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 GSTCDQ8NEC7 633 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 CCDC42Q96M95 316 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 ZFP42Q96MM3 310 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 ZNF830Q96NB3 372 aaPredicted RBP11.08□□□□□ -0.64
MDC1-205ENST00000425072 PI4K2AQ9BTU6 479 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 IL23AQ9NPF7 189 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 MIOSQ9NXC5 875 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 NXF1Q9UBU9 619 aaKnown RBP11.08□□□□□ -0.64
MDC1-205ENST00000425072 SIX4Q9UIU6 781 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 KIAA1257Q9ULG3 409 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 NUB1Q9Y5A7 615 aa11.08□□□□□ -0.64
MDC1-205ENST00000425072 SSU72P8A0A1W2PR75 194 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 CARNS1A5YM72 827 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 KPNA7A9QM74 516 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 PTGESO14684 152 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 CCP110O43303 1012 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 EVI5O60447 810 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 GFPT2O94808 682 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 BAIAP3O94812 1187 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms