RNA–Protein interactions for RNA: ENST00000424085.6

PUM1-205, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5 BASIC

Gene PUM1, Length 4,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-205ENST00000424085 TRPA1O75762 1119 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 ODC1P11926 461 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 GFAPP14136 432 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 FXR1P51114 621 aaKnown RBP eCLIP8.28□□□□□ -1.08
PUM1-205ENST00000424085 CAV1Q03135 178 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 PAN2Q504Q3 1202 aaKnown RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 SMIM5Q71RC9 77 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 REXO1L1PQ8IX06 675 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 USP13Q92995 863 aaPredicted RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 RIT2Q99578 217 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 CATSPERBQ9H7T0 1116 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 SENP2Q9HC62 589 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 FAM205CA6NFA0 338 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 SPDYE5A6NIY4 337 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 LZTS3O60299 673 aaPredicted RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 TRIM49P0CI25 452 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 TRIM49CP0CI26 452 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 ACOT2P49753 483 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 DEUP1Q05D60 604 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 PTPAQ15257 358 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 SPDYE7PQ495Y7 208 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 FSCBQ5H9T9 825 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 GSPT2Q8IYD1 628 aaKnown RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 PPM1NQ8N819 430 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 LINC00116Q8NCU8 138 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 WDR48Q8TAF3 677 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 ABHD8Q96I13 439 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 POLR3CQ9BUI4 534 aaPredicted RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 GPR63Q9BZJ6 419 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.28□□□□□ -1.089e-10■■■■■ 35.2
PUM1-205ENST00000424085 PPP1R9AQ9ULJ8 1098 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 CAPN11Q9UMQ6 739 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 SHPRHQ149N8 1683 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 ZW10O43264 779 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 ATP9BO43861 1147 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 SCP2P22307 547 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 HMOX2P30519 316 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 DPYDQ12882 1025 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 NCOA4Q13772 614 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 PDIA5Q14554 519 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 POLD3Q15054 466 aaPredicted RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 UGP2Q16851 508 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 FASTKD1Q53R41 847 aaKnown RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 PKN3Q6P5Z2 889 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 ELOA2Q8IYF1 753 aaPredicted RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 SLC7A14Q8TBB6 771 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 COG1Q8WTW3 980 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 MAML1Q92585 1016 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 TTC17Q96AE7 1141 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 OPTNQ96CV9 577 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 NRBF2Q96F24 287 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 CHP1Q99653 195 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 TRIM55Q9BYV6 548 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 RUBCNLQ9H714 662 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 RRAGCQ9HB90 399 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 GIMAP4Q9NUV9 329 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 DNAJC17Q9NVM6 304 aaKnown RBP8.28□□□□□ -1.08
PUM1-205ENST00000424085 TRPM5Q9NZQ8 1165 aa8.28□□□□□ -1.08
PUM1-205ENST00000424085 ITIH6Q6UXX5 1313 aa8.27□□□□□ -1.08
PUM1-205ENST00000424085 LRRC53A6NM62 1247 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 LRRIQ3A6PVS8 624 aaPredicted RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 ZSCAN9O15535 394 aaPredicted RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 ACSL3O95573 720 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 FAM200BP0CF97 657 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 ACADMP11310 421 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 H2AFXP16104 143 aaPredicted RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 TYK2P29597 1187 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 SBK1Q52WX2 424 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 LMBRD2Q68DH5 695 aaPredicted RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.27□□□□□ -1.09
PUM1-205ENST00000424085 ZNF34Q8IZ26 560 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 SHCBP1Q8NEM2 672 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 PPHLN1Q8NEY8 458 aaKnown RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 ZNF512BQ96KM6 892 aaPredicted RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 MOV10L1Q9BXT6 1211 aaKnown RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 UNC45AQ9H3U1 944 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 XAB2Q9HCS7 855 aaKnown RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 FGFR1OP2Q9NVK5 253 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 KCND2Q9NZV8 630 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 MSRAQ9UJ68 235 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 FAM50BQ9Y247 325 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 TARSL2A2RTX5 802 aaKnown RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 PP2D1A8MPX8 630 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 H0Y626 953 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 APOL1O14791 398 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 ZC3H11AO75152 810 aaKnown RBP eCLIP8.27□□□□□ -1.092e-9■□□□□ 10.7
PUM1-205ENST00000424085 FTLP02792 175 aaPredicted RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 CSF1RP07333 972 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 CLTAP09496 248 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 PDCLQ13371 301 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 BTG3Q14201 252 aaPredicted RBP8.27□□□□□ -1.09
PUM1-205ENST00000424085 DEFB128Q7Z7B8 93 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 RNF135Q8IUD6 432 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 TAGAPQ8N103 731 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 LRRC71Q8N4P6 559 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 RDM1Q8NG50 284 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 OR9Q1Q8NGQ5 310 aa8.27□□□□□ -1.09
PUM1-205ENST00000424085 CXorf38Q8TB03 319 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms