RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ANP32AP39687 249 aaKnown RBP16.52■□□□□ 0.24
USB1-202ENST00000423271 TXLNAP40222 546 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 HTR4Q13639 388 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 SLC39A14Q15043 492 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 UVSSAQ2YD98 709 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 FOXD4L6Q3SYB3 417 aaPredicted RBP16.52■□□□□ 0.24
USB1-202ENST00000423271 RRAGBQ5VZM2 374 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 CWF19L1Q69YN2 538 aaKnown RBP16.52■□□□□ 0.24
USB1-202ENST00000423271 FOXD4L3Q6VB84 417 aaPredicted RBP16.52■□□□□ 0.24
USB1-202ENST00000423271 ITFG1Q8TB96 612 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 DDX12PQ92771 950 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 PHOX2BQ99453 314 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 MFSD1Q9H3U5 465 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 RPF1Q9H9Y2 349 aaKnown RBP16.52■□□□□ 0.24
USB1-202ENST00000423271 CPSF3Q9UKF6 684 aaKnown RBP16.52■□□□□ 0.24
USB1-202ENST00000423271 UBQLN1Q9UMX0 589 aaKnown RBP16.52■□□□□ 0.24
USB1-202ENST00000423271 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 MORC2Q9Y6X9 1032 aaPredicted RBP16.52■□□□□ 0.24
USB1-202ENST00000423271 ANHXE9PGG2 379 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 H7C4K7 107 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 ABLIM3O94929 683 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 ADRB2P07550 413 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 CFHP08603 1231 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 NASPP49321 788 aaPredicted RBP16.51■□□□□ 0.23
USB1-202ENST00000423271 PTPN5P54829 565 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 KYAT1Q16773 422 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 CTXN3Q4LDR2 81 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 ALYREFQ86V81 257 aaKnown RBP16.51■□□□□ 0.23
USB1-202ENST00000423271 SLC44A3Q8N4M1 653 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 ZNF461Q8TAF7 563 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 FGF13Q92913 245 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 DNAJC19Q96DA6 116 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 FAM212AQ96EL1 285 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 ST6GALNAC4Q9H4F1 302 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 TBC1D7Q9P0N9 293 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 DNMT3BQ9UBC3 853 aaKnown RBP16.51■□□□□ 0.23
USB1-202ENST00000423271 FBXL21Q9UKT6 434 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 CDH7Q9ULB5 785 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 TIMM13Q9Y5L4 95 aaPredicted RBP16.51■□□□□ 0.23
USB1-202ENST00000423271 NUMBLQ9Y6R0 609 aa16.51■□□□□ 0.23
USB1-202ENST00000423271 M0QZQ0 153 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 PPP1R37O75864 691 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 SEC24AO95486 1093 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 NFICP08651 508 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 NPR3P17342 541 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 CYP3A5P20815 502 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 STAT6P42226 847 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 ACOT2P49753 483 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 KCNA1Q09470 495 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 PABPC1LQ4VXU2 614 aaKnown RBP16.5■□□□□ 0.23
USB1-202ENST00000423271 ASTLQ6HA08 431 aaPredicted RBP16.5■□□□□ 0.23
USB1-202ENST00000423271 JADE1Q6IE81 842 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 ZNF280DQ6N043 979 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 SV2BQ7L1I2 683 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 ZNF720Q7Z2F6 126 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 SIX5Q8N196 739 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 APPL2Q8NEU8 664 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 FLCNQ8NFG4 579 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 ING5Q8WYH8 240 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 FGF14Q92915 247 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 ZNF396Q96N95 335 aaPredicted RBP16.5■□□□□ 0.23
USB1-202ENST00000423271 PRRX2Q99811 253 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 RPP25Q9BUL9 199 aaKnown RBP16.5■□□□□ 0.23
USB1-202ENST00000423271 CYP4F11Q9HBI6 524 aa16.5■□□□□ 0.23
USB1-202ENST00000423271 TFIP11Q9UBB9 837 aaKnown RBP16.5■□□□□ 0.23
USB1-202ENST00000423271 ARHGEF37A1IGU5 675 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 PRRG1O14668 218 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 SRFP11831 508 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 ATF2P15336 505 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 ELF1P32519 619 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 ABCD1P33897 745 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 AARSP49588 968 aaKnown RBP eCLIP16.49■□□□□ 0.23
USB1-202ENST00000423271 STK38Q15208 465 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 SLC5A9Q2M3M2 681 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 SPATA1Q5VX52 437 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 ADALQ6DHV7 355 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 PARM1Q6UWI2 310 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 CCDC73Q6ZRK6 1079 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 NPAS3Q8IXF0 933 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 PDILTQ8N807 584 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 LINC00301Q8NCQ3 95 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 NXPE3Q969Y0 559 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 STRA6Q9BX79 667 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 FGFBP2Q9BYJ0 223 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 MRPL44Q9H9J2 332 aaKnown RBP16.49■□□□□ 0.23
USB1-202ENST00000423271 FAM86C1Q9NVL1 165 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 MYO15AQ9UKN7 3530 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 AGO2Q9UKV8 859 aaKnown RBP16.49■□□□□ 0.23
USB1-202ENST00000423271 INSL5Q9Y5Q6 135 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 STYXL1Q9Y6J8 313 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 ZFP37Q9Y6Q3 630 aaPredicted RBP16.49■□□□□ 0.23
USB1-202ENST00000423271 TSC2P49815 1807 aa16.49■□□□□ 0.23
USB1-202ENST00000423271 KRBA1A5PL33 1030 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 SPTLC1O15269 473 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 XPOTO43592 962 aaKnown RBP16.48■□□□□ 0.23
USB1-202ENST00000423271 LRG1P02750 347 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 RHOP08100 348 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 OR4Q2P0C623 313 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 CPB1P15086 417 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms