RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MAGEA9P43362 315 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 SEZ6Q53EL9 994 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 TPGS2Q68CL5 300 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 ZPBP2Q6X784 338 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 TPRG1Q6ZUI0 275 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 SYT2Q8N9I0 419 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-205ENST00000423214 TMEM161BQ8NDZ6 487 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 TBC1D32Q96NH3 1257 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 SPATA6Q9NWH7 488 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-205ENST00000423214 LARSQ9P2J5 1176 aaKnown RBP17.62■□□□□ 0.41
COL18A1-205ENST00000423214 TUBGCP4Q9UGJ1 667 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 KIF26AQ9ULI4 1882 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-205ENST00000423214 SCN1AP35498 2009 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 LAMTOR5O43504 91 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 PLA2G4BP0C869 781 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 GLULP15104 373 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 ID4P47928 161 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 FOXK2Q01167 660 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 CACNB1Q02641 598 aaPredicted RBP17.61■□□□□ 0.41
COL18A1-205ENST00000423214 PPP2R3AQ06190 1150 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 MCL1Q07820 350 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 ADCY1Q08828 1119 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 IQCEQ6IPM2 695 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 TCEAL8Q8IYN2 117 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 DDX12PQ92771 950 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 KIF12Q96FN5 646 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 PNMA5Q96PV4 448 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 NTPCRQ9BSD7 190 aaKnown RBP17.61■□□□□ 0.41
COL18A1-205ENST00000423214 DDX23Q9BUQ8 820 aaKnown RBP17.61■□□□□ 0.41
COL18A1-205ENST00000423214 LTB4R2Q9NPC1 389 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 PCDHB8Q9UN66 801 aa17.61■□□□□ 0.41
COL18A1-205ENST00000423214 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.61■□□□□ 0.41
COL18A1-205ENST00000423214 DENND4CQ5VZ89 1909 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 FAM170BA6NMN3 283 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 XPOTO43592 962 aaKnown RBP17.6■□□□□ 0.41
COL18A1-205ENST00000423214 SEC24AO95486 1093 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 GJB2P29033 226 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 MARCKSP29966 332 aaPredicted RBP17.6■□□□□ 0.41
COL18A1-205ENST00000423214 LIG4P49917 911 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 SLC12A3P55017 1021 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 MRPL58Q14197 206 aaKnown RBP17.6■□□□□ 0.41
COL18A1-205ENST00000423214 SLC10A6Q3KNW5 377 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 CYP4A22Q5TCH4 519 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 ARL6IP4Q66PJ3 421 aaKnown RBP17.6■□□□□ 0.41
COL18A1-205ENST00000423214 RASSF8Q8NHQ8 419 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 ELSPBP1Q96BH3 223 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 OSBPL6Q9BZF3 934 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 UPF2Q9HAU5 1272 aaKnown RBP17.6■□□□□ 0.41
COL18A1-205ENST00000423214 AFF4Q9UHB7 1163 aaKnown RBP17.6■□□□□ 0.41
COL18A1-205ENST00000423214 F5P12259 2224 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 DCHS1Q96JQ0 3298 aa17.6■□□□□ 0.41
COL18A1-205ENST00000423214 K7ENM7 598 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 HNRNPDLO14979 420 aaKnown RBP17.59■□□□□ 0.41
COL18A1-205ENST00000423214 NCAM2O15394 837 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 MEFVO15553 781 aaPredicted RBP17.59■□□□□ 0.41
COL18A1-205ENST00000423214 TBC1D4O60343 1298 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 KINO60870 393 aaKnown RBP17.59■□□□□ 0.41
COL18A1-205ENST00000423214 CLTAP09496 248 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 CD72P21854 359 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 NCKAP1LP55160 1127 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 YWHAHQ04917 246 aaPredicted RBP17.59■□□□□ 0.41
COL18A1-205ENST00000423214 TWF1Q12792 350 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 KYAT1Q16773 422 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 TMEM119Q4V9L6 283 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 PRSS36Q5K4E3 855 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 ZBTB41Q5SVQ8 909 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 DNASE1L2Q92874 299 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 TCEAL4Q96EI5 215 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 CALML4Q96GE6 196 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 AK8Q96MA6 479 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 ZNF512Q96ME7 567 aaPredicted RBP17.59■□□□□ 0.41
COL18A1-205ENST00000423214 BRD9Q9H8M2 597 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 PLEKHA5Q9HAU0 1116 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 ZFP14Q9HCL3 533 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 ASAH2Q9NR71 780 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 HEBP1Q9NRV9 189 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 ODF2LQ9ULJ1 636 aa17.59■□□□□ 0.41
COL18A1-205ENST00000423214 MRPS17Q9Y2R5 130 aaKnown RBP17.59■□□□□ 0.41
COL18A1-205ENST00000423214 OBSL1O75147 1896 aa17.58■□□□□ 0.41
COL18A1-205ENST00000423214 DMXL1Q9Y485 3027 aa17.58■□□□□ 0.41
COL18A1-205ENST00000423214 NPHP3-ACAD11A0A0J9YXS1 232 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 CD2BP2O95400 341 aaKnown RBP17.58■□□□□ 0.4
COL18A1-205ENST00000423214 TARSP26639 723 aaKnown RBP17.58■□□□□ 0.4
COL18A1-205ENST00000423214 SPAG1Q07617 926 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 GRM2Q14416 872 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 TANGO2Q6ICL3 276 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 ZNF852Q6ZMS4 543 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 HAUS6Q7Z4H7 955 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 USP37Q86T82 979 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 GPBP1Q86WP2 473 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 TMX3Q96JJ7 454 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 REEP2Q9BRK0 252 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 PLA2G2FQ9BZM2 168 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 FBXO4Q9UKT5 387 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 MAFFQ9ULX9 164 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 UBQLN1Q9UMX0 589 aaKnown RBP17.58■□□□□ 0.4
COL18A1-205ENST00000423214 MTF2Q9Y483 593 aaPredicted RBP17.58■□□□□ 0.4
COL18A1-205ENST00000423214 YIPF1Q9Y548 306 aa17.58■□□□□ 0.4
COL18A1-205ENST00000423214 RALGAPA1Q6GYQ0 2036 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 FRYLO94915 3013 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms