RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 GJA3Q9Y6H8 435 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 C3orf70A6NLC5 250 aaPredicted RBP9.72□□□□□ -0.85
CD109-202ENST00000422508 NEMP1O14524 444 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 ACADSBP45954 432 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 IREB2P48200 963 aaKnown RBP9.72□□□□□ -0.85
CD109-202ENST00000422508 CENPCQ03188 943 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 SLC20A1Q8WUM9 679 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 SYN2Q92777 582 aaPredicted RBP9.72□□□□□ -0.85
CD109-202ENST00000422508 CAMKK2Q96RR4 588 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 TJP2Q9UDY2 1190 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 KLHL3Q9UH77 587 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 RSL24D1Q9UHA3 163 aaKnown RBP9.72□□□□□ -0.85
CD109-202ENST00000422508 RGS20O76081 388 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 RESTQ13127 1097 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 PDAP1Q13442 181 aaKnown RBP9.72□□□□□ -0.85
CD109-202ENST00000422508 ZNF235Q14590 738 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 FAM83EQ2M2I3 478 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 EDRF1Q3B7T1 1238 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 DPCR1Q3MIW9 517 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 SETD9Q8NE22 299 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 GTF3C2Q8WUA4 911 aaPredicted RBP9.72□□□□□ -0.85
CD109-202ENST00000422508 DBNDD2Q9BQY9 259 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 BBS2Q9BXC9 721 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 SLC7A5P2Q9GIP4 190 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 SPRTNQ9H040 489 aaPredicted RBP9.72□□□□□ -0.85
CD109-202ENST00000422508 PI4KBQ9UBF8 816 aa9.72□□□□□ -0.85
CD109-202ENST00000422508 GSPT1P15170 499 aaKnown RBP9.71□□□□□ -0.85
CD109-202ENST00000422508 BCAR1P56945 870 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 LINC00301Q8NCQ3 95 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 NSL1Q96IY1 281 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 EVPLQ92817 2033 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 FLT1P17948 1338 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 CXCR5P32302 372 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 COX10Q12887 443 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 KRT77Q7Z794 578 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 AP3S1Q92572 193 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 GRID1Q9ULK0 1009 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 HNRNPH2P55795 449 aaKnown RBP9.71□□□□□ -0.85
CD109-202ENST00000422508 FAM89AQ96GI7 184 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 SENP7Q9BQF6 1050 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 BDH2Q9BUT1 245 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 AKAP7Q9P0M2 348 aaPredicted RBP9.71□□□□□ -0.85
CD109-202ENST00000422508 AKAP12Q02952 1782 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 CPSF1Q10570 1443 aaKnown RBP9.71□□□□□ -0.85
CD109-202ENST00000422508 CARNS1A5YM72 827 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 SLC2A3P11169 496 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 PHKA1P46020 1223 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 CUL4AQ13619 759 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 EZH2Q15910 746 aaKnown RBP9.71□□□□□ -0.85
CD109-202ENST00000422508 ZBED8Q8IZ13 594 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 AADATQ8N5Z0 425 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 COPRSQ9NQ92 184 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 UBAP1Q9NZ09 502 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 STK39Q9UEW8 545 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 ATP6V1HQ9UI12 483 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 SLC4A7Q9Y6M7 1214 aa9.71□□□□□ -0.85
CD109-202ENST00000422508 VEPH1Q14D04 833 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 TTLL9Q3SXZ7 439 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 GADL1Q6ZQY3 521 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 GANCQ8TET4 914 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 CNOT8Q9UFF9 292 aaKnown RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 SERPINB13Q9UIV8 391 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 FKBP6O75344 327 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 PPP1R37O75864 691 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 IL18RAPO95256 599 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 ACADLP28330 430 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 GNA15P30679 374 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 STAT3P40763 770 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 GPC3P51654 580 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 ZNF200P98182 395 aaPredicted RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 HIST2H2ACQ16777 129 aaPredicted RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 NDUFAF6Q330K2 333 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 HABP4Q5JVS0 413 aaKnown RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 HIST2H2AA3Q6FI13 130 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 ZCCHC8Q6NZY4 707 aaKnown RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 RBM46Q8TBY0 533 aaKnown RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 MCCC1Q96RQ3 725 aaPredicted RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 CATSPERBQ9H7T0 1116 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 ALDH1A1P00352 501 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 CYFIP1Q7L576 1253 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 MICU2Q8IYU8 434 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 MAGEB10Q96LZ2 347 aaPredicted RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 VPS11Q9H270 941 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 C20orf96Q9NUD7 363 aaPredicted RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 VAV3Q9UKW4 847 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 CCNYL1Q8N7R7 359 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 SNIP1Q8TAD8 396 aaKnown RBP9.71□□□□□ -0.86
CD109-202ENST00000422508 HAVCR1Q96D42 359 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 SLC10A4Q96EP9 437 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 PAGE5Q96GU1 130 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 TRIM51Q9BSJ1 452 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.86
CD109-202ENST00000422508 FMN2Q9NZ56 1722 aa9.7□□□□□ -0.86
CD109-202ENST00000422508 CD3EAPO15446 510 aaKnown RBP9.7□□□□□ -0.86
CD109-202ENST00000422508 FTCDO95954 541 aa9.7□□□□□ -0.86
CD109-202ENST00000422508 VCLP18206 1134 aa9.7□□□□□ -0.86
CD109-202ENST00000422508 DUOXA2Q1HG44 320 aa9.7□□□□□ -0.86
CD109-202ENST00000422508 ZCWPW2Q504Y3 356 aa9.7□□□□□ -0.86
CD109-202ENST00000422508 USP39Q53GS9 565 aaKnown RBP9.7□□□□□ -0.86
CD109-202ENST00000422508 NEK5Q6P3R8 708 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms