RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 EXTL3O43909 919 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 WEE2P0C1S8 567 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 HOXD13P35453 343 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 KMT5BQ4FZB7 885 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 KRBA2Q6ZNG9 492 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 GPD1LQ8N335 351 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 SCFD1Q8WVM8 642 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 CCDC47Q96A33 483 aaKnown RBP23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 CCDC34Q96HJ3 373 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 RIPOR3Q96MK2 946 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 PHF7Q9BWX1 381 aaPredicted RBP23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 CD320Q9NPF0 282 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 C2CD2Q9Y426 696 aa23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 PDCD11Q14690 1871 aaKnown RBP23.22■■□□□ 1.31
FNDC3B-204ENST00000421757 SYN3O14994 580 aa23.21■■□□□ 1.31
FNDC3B-204ENST00000421757 KIAA0391O15091 583 aaKnown RBP23.21■■□□□ 1.31
FNDC3B-204ENST00000421757 RPN1P04843 607 aaKnown RBP23.21■■□□□ 1.31
FNDC3B-204ENST00000421757 ATAT1Q5SQI0 421 aa23.21■■□□□ 1.31
FNDC3B-204ENST00000421757 HS2ST1Q7LGA3 356 aa23.21■■□□□ 1.31
FNDC3B-204ENST00000421757 BRSK2Q8IWQ3 736 aa23.21■■□□□ 1.31
FNDC3B-204ENST00000421757 RPGRIP1Q96KN7 1286 aa23.21■■□□□ 1.31
FNDC3B-204ENST00000421757 SUSD3Q96L08 255 aa23.21■■□□□ 1.31
FNDC3B-204ENST00000421757 MTRRQ9UBK8 725 aa23.21■■□□□ 1.31
FNDC3B-204ENST00000421757 PRR29P0C7W0 189 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 OR1D2P34982 312 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 MTHFRP42898 656 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 PSMD2Q13200 908 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 VARS2Q5ST30 1063 aaKnown RBP23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 DSTYKQ6XUX3 929 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 KREMEN2Q8NCW0 462 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 APPL2Q8NEU8 664 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 NECTIN4Q96NY8 510 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 PLEKHA4Q9H4M7 779 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 AGPAT3Q9NRZ7 376 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 DPP3Q9NY33 737 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 HSPBP1Q9NZL4 362 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 CDY1Q9Y6F8 540 aa23.2■■□□□ 1.3
FNDC3B-204ENST00000421757 H7C4K7 107 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 CLIC2O15247 247 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 ADAM12O43184 909 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 TGFB1I1O43294 461 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 C1RP00736 705 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 TFAMQ00059 246 aaKnown RBP23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 STK4Q13043 487 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 KNOP1Q1ED39 458 aaKnown RBP23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 C9orf57Q5W0N0 161 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 LILRA6Q6PI73 481 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 NT5DC4Q86YG4 428 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 EFCAB13Q8IY85 973 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 HDAC7Q8WUI4 952 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 TSHZ2Q9NRE2 1034 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 PCDHB8Q9UN66 801 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 BACE2Q9Y5Z0 518 aa23.19■■□□□ 1.3
FNDC3B-204ENST00000421757 TTC28Q96AY4 2481 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 CCDC195A0A1B0GUA6 201 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 ZNF233A6NK53 670 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 PPEF2O14830 753 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 RFPL2O75678 378 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 SP100P23497 879 aaPredicted RBP23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 CYP2J2P51589 502 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 ARPP19P56211 112 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 SNRPFP62306 86 aaKnown RBP23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 BMT2Q1RMZ1 405 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 GPR149Q86SP6 731 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 CACTINQ8WUQ7 758 aaKnown RBP23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 POMKQ9H5K3 350 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 KIAA1586Q9HCI6 787 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 VWA8A3KMH1 1905 aa23.18■■□□□ 1.3
FNDC3B-204ENST00000421757 PLXNA3P51805 1871 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 C5orf42Q9H799 3197 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 C19orf67A6NJJ6 358 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 WNT7BP56706 349 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 DPYDQ12882 1025 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 RAB33AQ14088 237 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 CTXN3Q4LDR2 81 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 LIN9Q5TKA1 542 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 RSPO2Q6UXX9 243 aaPredicted RBP23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 CBWD2Q8IUF1 395 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 RDH13Q8NBN7 331 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 KIAA0895Q8NCT3 520 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 PDE11AQ9HCR9 933 aa23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 TIMM13Q9Y5L4 95 aaPredicted RBP23.17■■□□□ 1.3
FNDC3B-204ENST00000421757 CUL9Q8IWT3 2517 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 M0QZQ0 153 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 PIRO00625 290 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 LILRA4P59901 499 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 YWHAHQ04917 246 aaPredicted RBP23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 ZNF280DQ6N043 979 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 C15orf39Q6ZRI6 1047 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 USP37Q86T82 979 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 FMR1NBQ8N0W7 255 aaPredicted RBP23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 FEZF2Q8TBJ5 459 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 PIDD1Q9HB75 910 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 CHMP5Q9NZZ3 219 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 CGNQ9P2M7 1197 aaKnown RBP23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 FBXW11Q9UKB1 542 aa23.16■■□□□ 1.3
FNDC3B-204ENST00000421757 ANO9A1A5B4 782 aa23.15■■□□□ 1.3
FNDC3B-204ENST00000421757 TMEM191BP0C7N4 346 aa23.15■■□□□ 1.3
FNDC3B-204ENST00000421757 PAX3P23760 479 aa23.15■■□□□ 1.3
FNDC3B-204ENST00000421757 AARSP49588 968 aaKnown RBP eCLIP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms