RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 UBE4BO95155 1302 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 WDR91A4D1P6 747 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 VNN1O95497 513 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 KRT1P04264 644 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 SKOR1P84550 965 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 XKR3Q5GH77 459 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 LRRC34Q8IZ02 419 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 KLF6Q99612 283 aaPredicted RBP14.2□□□□□ -0.14
MCF2L-213ENST00000421756 BTBD7Q9P203 1132 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 MROH7Q68CQ1 1323 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 PDE4DIPQ5VU43 2346 aa14.2□□□□□ -0.14
MCF2L-213ENST00000421756 FOCADQ5VW36 1801 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 SUPT20HL2P0C7V6 817 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 UBA1P22314 1058 aaKnown RBP14.19□□□□□ -0.14
MCF2L-213ENST00000421756 TMED2Q15363 201 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 SUPT20HL1Q3ZLR7 823 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 SEC16BQ96JE7 1060 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 ALG13Q9NP73 1137 aaKnown RBP14.19□□□□□ -0.14
MCF2L-213ENST00000421756 A0A087WUV0 522 aaPredicted RBP14.19□□□□□ -0.14
MCF2L-213ENST00000421756 OATP04181 439 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 CACNA2D3Q8IZS8 1091 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 MREGQ8N565 214 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 DDX1Q92499 740 aaKnown RBP14.19□□□□□ -0.14
MCF2L-213ENST00000421756 ARHGEF2Q92974 986 aaKnown RBP14.19□□□□□ -0.14
MCF2L-213ENST00000421756 VPS37BQ9H9H4 285 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 AGTPBP1Q9UPW5 1226 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 PCDHA3Q9Y5H8 950 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 MEFVO15553 781 aaPredicted RBP14.19□□□□□ -0.14
MCF2L-213ENST00000421756 RPS6KA5O75582 802 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 GPC3P51654 580 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 CUL2Q13617 745 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 ALCAMQ13740 583 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 WDR72Q3MJ13 1102 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 ABHD15Q6UXT9 468 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 PNMA8AQ86V59 439 aaPredicted RBP14.19□□□□□ -0.14
MCF2L-213ENST00000421756 HOOK3Q86VS8 718 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 TMEM121Q9BTD3 319 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 PDGFCQ9NRA1 345 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 IVNS1ABPQ9Y6Y0 642 aa14.19□□□□□ -0.14
MCF2L-213ENST00000421756 LAMA2P24043 3122 aaKnown RBP14.18□□□□□ -0.14
MCF2L-213ENST00000421756 GOLGA8RI6L899 631 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 IRF6O14896 467 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 TMEM191BP0C7N4 346 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 YY1P25490 414 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 CAPSQ13938 189 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 VGLL4Q14135 290 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 P3H1Q32P28 736 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 GPAT2Q6NUI2 795 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 EFCAB13Q8IY85 973 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 NETO2Q8NC67 525 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 EPB41L4BQ9H329 900 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
MCF2L-213ENST00000421756 PCDHB2Q9Y5E7 798 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 LRRC37AA6NMS7 1700 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 SGK1O00141 431 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 EXTL3O43909 919 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 GRIN3BO60391 1043 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 FAM107AO95990 144 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 POTEJP0CG39 1038 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 E2F5Q15329 346 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 LIN9Q5TKA1 542 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 FKBP1CQ5VVH2 108 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 NUGGCQ68CJ6 796 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 OSBPL8Q9BZF1 889 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 C12orf65Q9H3J6 166 aaKnown RBP14.18□□□□□ -0.14
MCF2L-213ENST00000421756 KIF9Q9HAQ2 790 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 HAUS2Q9NVX0 235 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 DOCK5Q9H7D0 1870 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 RIPK2O43353 540 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 DHX34Q14147 1143 aaKnown RBP14.18□□□□□ -0.14
MCF2L-213ENST00000421756 FASTKD3Q14CZ7 662 aaKnown RBP14.18□□□□□ -0.14
MCF2L-213ENST00000421756 GKAP1Q5VSY0 366 aaPredicted RBP14.18□□□□□ -0.14
MCF2L-213ENST00000421756 C4orf33Q8N1A6 199 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 ZNF606Q8WXB4 792 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 GPRASP2Q96D09 838 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 XPO6Q96QU8 1125 aaKnown RBP14.18□□□□□ -0.14
MCF2L-213ENST00000421756 SAYSD1Q9NPB0 183 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 FGFR1OP2Q9NVK5 253 aa14.18□□□□□ -0.14
MCF2L-213ENST00000421756 ARIH2O95376 493 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 GZMAP12544 262 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 GAD2Q05329 585 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 IZUMO3Q5VZ72 239 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 C11orf63Q6NUN7 778 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 CRELD2Q6UXH1 353 aaPredicted RBP14.17□□□□□ -0.14
MCF2L-213ENST00000421756 UBA3Q8TBC4 463 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 HSPH1Q92598 858 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 CPB2Q96IY4 423 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 APOL6Q9BWW8 343 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 SLC12A6Q9UHW9 1150 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 DNPEPQ9ULA0 475 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 GAS8O95995 478 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 LACTBP83111 547 aaPredicted RBP14.17□□□□□ -0.14
MCF2L-213ENST00000421756 GPS1Q13098 491 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 MFSD7Q6UXD7 560 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 CYP4X1Q8N118 509 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 TBC1D31Q96DN5 1066 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 MFSD14AQ96MC6 490 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 PLVAPQ9BX97 442 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 CALN1Q9BXU9 219 aa14.17□□□□□ -0.14
MCF2L-213ENST00000421756 HOXC10Q9NYD6 342 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms