RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CTNNB1P35222 781 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 KCNH2Q12809 1159 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 CBWD6Q4V339 395 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 CBWD3Q5JTY5 395 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 CBWD5Q5RIA9 395 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 TMEM173Q86WV6 379 aaPredicted RBP18.92■□□□□ 0.62
LINC00271-201ENST00000421378 C17orf80Q9BSJ5 609 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 SIX4Q9UIU6 781 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 MTUS1Q9ULD2 1270 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 F8W810 466 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 PIRO00625 290 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 N4BP1O75113 896 aaKnown RBP18.91■□□□□ 0.62
LINC00271-201ENST00000421378 AFPP02771 609 aaKnown RBP18.91■□□□□ 0.62
LINC00271-201ENST00000421378 ATP1A3P13637 1013 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 BMPR1AP36894 532 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 FMO5P49326 533 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 RBP5P82980 135 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 TRPC3Q13507 836 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 KRT31Q15323 416 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 DCLRE1AQ6PJP8 1040 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 SPRED2Q7Z698 418 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 C3orf58Q8NDZ4 430 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 CXorf38Q8TB03 319 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 HASPINQ8TF76 798 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 ZNF560Q96MR9 790 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 SAMD11Q96NU1 681 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 COLEC11Q9BWP8 271 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 PLVAPQ9BX97 442 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 MARCH5Q9NX47 278 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 AGAP1Q9UPQ3 857 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 NUB1Q9Y5A7 615 aa18.91■□□□□ 0.62
LINC00271-201ENST00000421378 TMEM189-UBE2V1I3L0A0 370 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 PPEF2O14830 753 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 ITGB1P05556 798 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 TPM2P07951 284 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 PNPLA4P41247 253 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 PIK3CAP42336 1068 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 ERVK-21P61565 698 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 MYL7Q01449 175 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 NCOA4Q13772 614 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 EPC2Q52LR7 807 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 SLC39A11Q8N1S5 342 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 LRRC52Q8N7C0 313 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 TMEM169Q96HH4 297 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 IGSF21Q96ID5 467 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 TAB2Q9NYJ8 693 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 SPG21Q9NZD8 308 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 ADAM28Q9UKQ2 775 aa18.9■□□□□ 0.62
LINC00271-201ENST00000421378 C5orf67F2Z3F1 127 aa18.89■□□□□ 0.62
LINC00271-201ENST00000421378 PES1O00541 588 aaKnown RBP18.89■□□□□ 0.62
LINC00271-201ENST00000421378 TADA2AO75478 443 aa18.89■□□□□ 0.62
LINC00271-201ENST00000421378 CETN1Q12798 172 aa18.89■□□□□ 0.62
LINC00271-201ENST00000421378 VWA3BQ502W6 1294 aa18.89■□□□□ 0.62
LINC00271-201ENST00000421378 MIIPQ5JXC2 388 aa18.89■□□□□ 0.62
LINC00271-201ENST00000421378 SCARA3Q6AZY7 606 aa18.89■□□□□ 0.62
LINC00271-201ENST00000421378 FBXL13Q8NEE6 735 aa18.89■□□□□ 0.62
LINC00271-201ENST00000421378 TAS1R2Q8TE23 839 aa18.89■□□□□ 0.62
LINC00271-201ENST00000421378 NDST4Q9H3R1 872 aa18.89■□□□□ 0.62
LINC00271-201ENST00000421378 LIMA1Q9UHB6 759 aaKnown RBP18.89■□□□□ 0.62
LINC00271-201ENST00000421378 FGF18O76093 207 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 CLSTN1O94985 981 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 VNN1O95497 513 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 CST3P01034 146 aaPredicted RBP18.89■□□□□ 0.61
LINC00271-201ENST00000421378 RB1P06400 928 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 TAF6P49848 677 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 LILRA4P59901 499 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 MYO1EQ12965 1108 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 GAS2L3Q86XJ1 694 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 KLHL23Q8NBE8 558 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 BCL7CQ8WUZ0 217 aaPredicted RBP18.89■□□□□ 0.61
LINC00271-201ENST00000421378 C11orf84Q9BUA3 381 aaPredicted RBP18.89■□□□□ 0.61
LINC00271-201ENST00000421378 IMPG2Q9BZV3 1241 aa18.89■□□□□ 0.61
LINC00271-201ENST00000421378 SF3B1O75533 1304 aaKnown RBP eCLIP18.88■□□□□ 0.61
LINC00271-201ENST00000421378 SCN1AP35498 2009 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 PMM2O15305 246 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 P4HA2O15460 535 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 HLA-DRAP01903 254 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 IGFBP6P24592 240 aaPredicted RBP18.88■□□□□ 0.61
LINC00271-201ENST00000421378 MYL6P60660 151 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 SV2CQ496J9 727 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 HPDLQ96IR7 371 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 VPS16Q9H269 839 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 CERS4Q9HA82 394 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 COQ4Q9Y3A0 265 aa18.88■□□□□ 0.61
LINC00271-201ENST00000421378 LRRC10BA6NIK2 292 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 TRAPPC3O43617 180 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 PAX3P23760 479 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 ATICP31939 592 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 AARSP49588 968 aaKnown RBP eCLIP18.87■□□□□ 0.61
LINC00271-201ENST00000421378 COPB1P53618 953 aaKnown RBP18.87■□□□□ 0.61
LINC00271-201ENST00000421378 PLCB3Q01970 1234 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 KRT17Q04695 432 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 ZNF699Q32M78 642 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 FUT10Q6P4F1 479 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 CD300LGQ6UXG3 332 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 CCDC150Q8NCX0 1101 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 FBXO22Q8NEZ5 403 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 ARNTL2Q8WYA1 636 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 XYLT2Q9H1B5 865 aa18.87■□□□□ 0.61
LINC00271-201ENST00000421378 RAB20Q9NX57 234 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms