RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 RIN2Q8WYP3 895 aaPredicted RBP20.1■□□□□ 0.81
DDR1-233ENST00000421124 DHTKD1Q96HY7 919 aaPredicted RBP20.1■□□□□ 0.81
DDR1-233ENST00000421124 ANKRD36BP1Q96IX9 119 aa20.1■□□□□ 0.81
DDR1-233ENST00000421124 FNBP1Q96RU3 617 aa20.1■□□□□ 0.81
DDR1-233ENST00000421124 EMILIN2Q9BXX0 1053 aa20.1■□□□□ 0.81
DDR1-233ENST00000421124 INTS13Q9NVM9 706 aa20.1■□□□□ 0.81
DDR1-233ENST00000421124 BRWD1Q9NSI6 2320 aa20.1■□□□□ 0.81
DDR1-233ENST00000421124 PTPRJQ12913 1337 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 PIRO00625 290 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 PPEF2O14830 753 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 DLATP10515 647 aaKnown RBP20.09■□□□□ 0.81
DDR1-233ENST00000421124 FGFR3P22607 806 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 CCNE1P24864 410 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 ADAM9Q13443 819 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 COL19A1Q14993 1142 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 DUOXA2Q1HG44 320 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 RTP2Q5QGT7 225 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 LMBRD2Q68DH5 695 aaPredicted RBP20.09■□□□□ 0.81
DDR1-233ENST00000421124 EFHBQ8N7U6 833 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 C1orf127Q8N9H9 656 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 CCDC127Q96BQ5 260 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 PABPC5Q96DU9 382 aaKnown RBP20.09■□□□□ 0.81
DDR1-233ENST00000421124 SUSD3Q96L08 255 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 CGRRF1Q99675 332 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 MTMR12Q9C0I1 747 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.09■□□□□ 0.81
DDR1-233ENST00000421124 ITGA11Q9UKX5 1188 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 PLXNA3P51805 1871 aa20.09■□□□□ 0.81
DDR1-233ENST00000421124 PPP1R3GB7ZBB8 358 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 MAPK13O15264 365 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 TNNC2P02585 160 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 ITGB3P05106 788 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 TNNI1P19237 187 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 PAX3P23760 479 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 AARSP49588 968 aaKnown RBP eCLIP20.08■□□□□ 0.81
DDR1-233ENST00000421124 CREMQ03060 361 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 LRRC63Q05C16 580 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 ANKRD40Q6AI12 368 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 KLHL10Q6JEL2 608 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 PDXDC1Q6P996 788 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 OR5B17Q8NGF7 314 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 PIK3R5Q8WYR1 880 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 HLA-CQ95604 372 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 FAM84AQ96KN4 292 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 KLHL5Q96PQ7 755 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 RXFP1Q9HBX9 757 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 CLDND1Q9NY35 253 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 COG5Q9UP83 839 aa20.08■□□□□ 0.81
DDR1-233ENST00000421124 TSC2P49815 1807 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 TRIM49BA6NDI0 452 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 SYN3O14994 580 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 CETN3O15182 167 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 LINC01565O15544 149 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 CLASP2O75122 1294 aaKnown RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 AKAP3O75969 853 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 CNPP09543 421 aaKnown RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 TKTP29401 623 aaKnown RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 POLR2BP30876 1174 aaKnown RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 PMS1P54277 932 aaKnown RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 LILRA4P59901 499 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 ADAM15Q13444 863 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 CTC1Q2NKJ3 1217 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 PRSS55Q6UWB4 352 aaPredicted RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 FAM186BQ8IYM0 893 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 CSGALNACT2Q8N6G5 542 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 PLEKHO2Q8TD55 490 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 TMC2Q8TDI7 906 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 PARD3BQ8TEW8 1205 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 ZNF560Q96MR9 790 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 POP1Q99575 1024 aaKnown RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 GZF1Q9H116 711 aaPredicted RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 UBE2ZQ9H832 354 aaPredicted RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 PRDM6Q9NQX0 595 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 FNIP2Q9P278 1114 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 AGAP1Q9UPQ3 857 aa20.07■□□□□ 0.8
DDR1-233ENST00000421124 MTCL1Q9Y4B5 1905 aaKnown RBP20.07■□□□□ 0.8
DDR1-233ENST00000421124 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.06■□□□□ 0.8
DDR1-233ENST00000421124 M0QZQ0 153 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 ADH1AP07327 375 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 KLRC2P26717 231 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 PSMC2P35998 433 aaKnown RBP20.06■□□□□ 0.8
DDR1-233ENST00000421124 PNPLA4P41247 253 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 TAF6P49848 677 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 FKBP3Q00688 224 aaKnown RBP20.06■□□□□ 0.8
DDR1-233ENST00000421124 PSMD5Q16401 504 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 DSTYKQ6XUX3 929 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 EP400NLQ6ZTU2 488 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 PPFIBP1Q86W92 1011 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 LNX1Q8TBB1 728 aaPredicted RBP20.06■□□□□ 0.8
DDR1-233ENST00000421124 NELFBQ8WX92 580 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 MKNK1Q9BUB5 465 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 THEGQ9P2T0 379 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 SIX4Q9UIU6 781 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 PCDHB8Q9UN66 801 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 CTNND2Q9UQB3 1225 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 R3HCC1Q9Y3T6 440 aaKnown RBP20.06■□□□□ 0.8
DDR1-233ENST00000421124 PRUNE2Q8WUY3 3088 aa20.06■□□□□ 0.8
DDR1-233ENST00000421124 BICDL2A1A5D9 508 aa20.05■□□□□ 0.8
DDR1-233ENST00000421124 LRRIQ3A6PVS8 624 aaPredicted RBP20.05■□□□□ 0.8
DDR1-233ENST00000421124 SPTLC1O15269 473 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms