RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 SYN3O14994 580 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 IL18RAPO95256 599 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 SNRPFP62306 86 aaKnown RBP23.2■■□□□ 1.3
CPNE1-211ENST00000420363 SIGLEC14Q08ET2 396 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 TMEM132DQ14C87 1099 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 PSMD5Q16401 504 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 SPATA1Q5VX52 437 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 CES5AQ6NT32 575 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 CRELD2Q6UXH1 353 aaPredicted RBP23.2■■□□□ 1.3
CPNE1-211ENST00000420363 GRAMD1CQ8IYS0 662 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 GLIS3Q8NEA6 775 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 LNX1Q8TBB1 728 aaPredicted RBP23.2■■□□□ 1.3
CPNE1-211ENST00000420363 ZNF507Q8TCN5 953 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 HDAC7Q8WUI4 952 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 GOLPH3LQ9H4A5 285 aa23.2■■□□□ 1.3
CPNE1-211ENST00000420363 KLRC4O43908 158 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 PAX3P23760 479 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 JADE1Q6IE81 842 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 ARMCX5Q6P1M9 558 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 BRSK2Q8IWQ3 736 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 BEST2Q8NFU1 509 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 SCFD1Q8WVM8 642 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 SUSD3Q96L08 255 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 CBWD1Q9BRT8 395 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 ADAM7Q9H2U9 754 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 TSHZ2Q9NRE2 1034 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 MTRRQ9UBK8 725 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 NR2E1Q9Y466 385 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 NUB1Q9Y5A7 615 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 DENND4AQ7Z401 1863 aa23.19■■□□□ 1.3
CPNE1-211ENST00000420363 EXTL3O43909 919 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 PAPLNO95428 1278 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 NFICP08651 508 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 SP100P23497 879 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-211ENST00000420363 IGFBP6P24592 240 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-211ENST00000420363 HOXD13P35453 343 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 BRCC3P46736 316 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 AARSP49588 968 aaKnown RBP eCLIP23.18■■□□□ 1.3
CPNE1-211ENST00000420363 SPAG1Q07617 926 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 PSMD2Q13200 908 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 PTPN21Q16825 1174 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 PRSS55Q6UWB4 352 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-211ENST00000420363 KRBA2Q6ZNG9 492 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 ANKS3Q6ZW76 656 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 CEP57Q86XR8 500 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 FBXL6Q8N531 539 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 CMASQ8NFW8 434 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-211ENST00000420363 CCDC34Q96HJ3 373 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 NECTIN4Q96NY8 510 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 PRRX2Q99811 253 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 RHOBTB2Q9BYZ6 727 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 PLEKHA4Q9H4M7 779 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 MAN1C1Q9NR34 630 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 EXOC1Q9NV70 894 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 CGNQ9P2M7 1197 aaKnown RBP23.18■■□□□ 1.3
CPNE1-211ENST00000420363 BACE2Q9Y5Z0 518 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 ZNF318Q5VUA4 2279 aa23.18■■□□□ 1.3
CPNE1-211ENST00000420363 TKTP29401 623 aaKnown RBP23.17■■□□□ 1.3
CPNE1-211ENST00000420363 ANP32AP39687 249 aaKnown RBP23.17■■□□□ 1.3
CPNE1-211ENST00000420363 IER5LQ5T953 404 aa23.17■■□□□ 1.3
CPNE1-211ENST00000420363 GPD1LQ8N335 351 aa23.17■■□□□ 1.3
CPNE1-211ENST00000420363 FAM212AQ96EL1 285 aa23.17■■□□□ 1.3
CPNE1-211ENST00000420363 FAM213AQ9BRX8 229 aa23.17■■□□□ 1.3
CPNE1-211ENST00000420363 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-211ENST00000420363 ZNF202O95125 648 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 MCM4P33991 863 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 MTHFRP42898 656 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 LILRA6Q6PI73 481 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 C15orf39Q6ZRI6 1047 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 HS2ST1Q7LGA3 356 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 SAAL1Q96ER3 474 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 RIPOR3Q96MK2 946 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 CLSTN3Q9BQT9 956 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 SLC39A2Q9NP94 309 aa23.16■■□□□ 1.3
CPNE1-211ENST00000420363 RBAKQ9NYW8 714 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-211ENST00000420363 TSC2P49815 1807 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 GOLGA6L4A6NEF3 574 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 I3L4J1 428 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 M0QZQ0 153 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 TGFB1I1O43294 461 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 TGM5O43548 720 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 RPL17P18621 184 aaKnown RBP23.15■■□□□ 1.3
CPNE1-211ENST00000420363 PTPN5P54829 565 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 KMT5BQ4FZB7 885 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 RARS2Q5T160 578 aaKnown RBP23.15■■□□□ 1.3
CPNE1-211ENST00000420363 KANK3Q6NY19 840 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 CYP26C1Q6V0L0 522 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 EFCAB13Q8IY85 973 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 KIAA0895Q8NCT3 520 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 APPL2Q8NEU8 664 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 PRSS33Q8NF86 280 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 KIAA1586Q9HCI6 787 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 AGPAT3Q9NRZ7 376 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 FBXW11Q9UKB1 542 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 PCDHB8Q9UN66 801 aa23.15■■□□□ 1.3
CPNE1-211ENST00000420363 C2orf16Q68DN1 1984 aa23.14■■□□□ 1.3
CPNE1-211ENST00000420363 ANO9A1A5B4 782 aa23.14■■□□□ 1.29
CPNE1-211ENST00000420363 RPN1P04843 607 aaKnown RBP23.14■■□□□ 1.29
CPNE1-211ENST00000420363 DPYDQ12882 1025 aa23.14■■□□□ 1.29
CPNE1-211ENST00000420363 RAB33AQ14088 237 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms