RNA–Protein interactions for RNA: ENST00000419113.5

NDUFA3-206, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-206ENST00000419113 CLCNKBP51801 687 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 COPB1P53618 953 aaKnown RBP17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 MYL7Q01449 175 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 SV2CQ496J9 727 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 FKBP15Q5T1M5 1219 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 COLGALT1Q8NBJ5 622 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 GOLGA2P5Q9HBQ8 144 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 TAB2Q9NYJ8 693 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 DNAJB4Q9UDY4 337 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 AGAP1Q9UPQ3 857 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 COLQQ9Y215 455 aaPredicted RBP17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 COQ4Q9Y3A0 265 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 NUB1Q9Y5A7 615 aa17.69■□□□□ 0.42
NDUFA3-206ENST00000419113 LCHNA4D1U4 455 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 TRAPPC3O43617 180 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 B3GAT3O94766 335 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 SERPINC1P01008 464 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 ATP1A3P13637 1013 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 POLR2BP30876 1174 aaKnown RBP17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 TAF6P49848 677 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 ELAVL2Q12926 359 aaKnown RBP17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 NCOA4Q13772 614 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 SGSM1Q2NKQ1 1148 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 CBWD6Q4V339 395 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 CBWD3Q5JTY5 395 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 CBWD5Q5RIA9 395 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 TMEM169Q96HH4 297 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 TGS1Q96RS0 853 aaKnown RBP17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 VPS16Q9H269 839 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 SLC28A3Q9HAS3 691 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 SPG21Q9NZD8 308 aa17.68■□□□□ 0.42
NDUFA3-206ENST00000419113 C5orf67F2Z3F1 127 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 B4GALT3O60512 393 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 TADA2AO75478 443 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 HLA-DRAP01903 254 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 TPM3P06753 285 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 DNAJB2P25686 324 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 BMPR1AP36894 532 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 GUCY2FP51841 1108 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 UVSSAQ2YD98 709 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 WDR44Q5JSH3 913 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 MIIPQ5JXC2 388 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 GBP6Q6ZN66 633 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 GAS2L3Q86XJ1 694 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 SLC39A11Q8N1S5 342 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 CXorf38Q8TB03 319 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 FAXDC2Q96IV6 333 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 RBSNQ9H1K0 784 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 VRTNQ9H8Y1 702 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 RAB20Q9NX57 234 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 HCSTQ9UBK5 93 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 SIX4Q9UIU6 781 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 ADAM28Q9UKQ2 775 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 YBX2Q9Y2T7 364 aaKnown RBP17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 PRG3Q9Y2Y8 225 aaPredicted RBP17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 SCN1AP35498 2009 aa17.67■□□□□ 0.42
NDUFA3-206ENST00000419113 TMEM265A0A087WTH1 108 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 LGALS16A8MUM7 142 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 CBFA2T2O43439 604 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 LINC00271P0C7V0 271 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 P4HA1P13674 534 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 MYOGP15173 224 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 CTNNB1P35222 781 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 PBX2P40425 430 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 ERVK-21P61565 698 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 FANCCQ00597 558 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 PLCB3Q01970 1234 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 TAP1Q03518 808 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 KRT17Q04695 432 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 EPC2Q52LR7 807 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 PPP2R2DQ66LE6 453 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 TAS1R2Q8TE23 839 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 IGSF21Q96ID5 467 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 HPDLQ96IR7 371 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 PAAF1Q9BRP4 392 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 C11orf84Q9BUA3 381 aaPredicted RBP17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 NKX2-4Q9H2Z4 354 aa17.66■□□□□ 0.42
NDUFA3-206ENST00000419113 SF3B1O75533 1304 aaKnown RBP eCLIP17.66■□□□□ 0.428e-6■■■■■ 107
NDUFA3-206ENST00000419113 KPNA7A9QM74 516 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 CLSTN1O94985 981 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 KIF4AO95239 1232 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 VNN1O95497 513 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 ASS1P00966 412 aaKnown RBP17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 CST3P01034 146 aaPredicted RBP17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 AARSP49588 968 aaKnown RBP eCLIP17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 LILRA4P59901 499 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 MYL6P60660 151 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 UBE3AQ05086 875 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 EXOC3L4Q17RC7 722 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 ZNF699Q32M78 642 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 ZNF667Q5HYK9 610 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 APTXQ7Z2E3 356 aaKnown RBP17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 TIFAQ96CG3 184 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 FAM81BQ96LP2 452 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 MARCH5Q9NX47 278 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 GDAP2Q9NXN4 497 aa17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 PUF60Q9UHX1 559 aaKnown RBP17.65■□□□□ 0.42
NDUFA3-206ENST00000419113 A0A1B0GTH6 734 aa17.64■□□□□ 0.41
NDUFA3-206ENST00000419113 NT5C1B-RDH14C9J2C7 533 aa17.64■□□□□ 0.41
NDUFA3-206ENST00000419113 UBASH3AP57075 661 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms