RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 HOXC8P31273 242 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 CDH5P33151 784 aaPredicted RBP9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 CTNNA1P35221 906 aaKnown RBP9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 ASPAP45381 313 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 PEX5P50542 639 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 MYL6P60660 151 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 YWHAEP62258 255 aaKnown RBP9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 IGBP1P78318 339 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 C1QBPQ07021 282 aaKnown RBP9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 CASP8Q14790 479 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 TAF1CQ15572 869 aaPredicted RBP9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 RGMBQ6NW40 437 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 EMBQ6PCB8 327 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 SAPCD2Q86UD0 394 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 CEP120Q8N960 986 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 SOCS4Q8WXH5 440 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 ALG3Q92685 438 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 KAT2BQ92831 832 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 ELMO3Q96BJ8 720 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 ZBTB10Q96DT7 871 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 NAP1L3Q99457 506 aaPredicted RBP9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 APBA2Q99767 749 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 ZSWIM1Q9BR11 485 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 NUP85Q9BW27 656 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 BCO2Q9BYV7 579 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 ADAMTS10Q9H324 1103 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 RNF216Q9NWF9 866 aaPredicted RBP9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 CNOT8Q9UFF9 292 aaKnown RBP9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 SIX4Q9UIU6 781 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 GJD2Q9UKL4 321 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 AKT3Q9Y243 479 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 C2CD2Q9Y426 696 aa9.68□□□□□ -0.86
LINCMD1-201ENST00000418518 MROH7Q68CQ1 1323 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 NRCAMQ92823 1304 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 A0A1B0GUA9 196 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 ATMINO43313 823 aaPredicted RBP9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 CST3P01034 146 aaPredicted RBP9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 VTNP04004 478 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 STAG3L1P0CL83 205 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 CXCL8P10145 99 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 ATICP31939 592 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 RGS2P41220 211 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 GRM5P41594 1212 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 AARSP49588 968 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 ZNF157P51786 506 aaPredicted RBP9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 EPHB4P54760 987 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 PTP4A2Q12974 167 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 ZNF699Q32M78 642 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 DCAF4L1Q3SXM0 396 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 SCARA3Q6AZY7 606 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 PLEKHA7Q6IQ23 1121 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 TMEM270Q6UE05 265 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 CD302Q8IX05 232 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 THNSL1Q8IYQ7 743 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 UBL4BQ8N7F7 174 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 HDAC7Q8WUI4 952 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 SEC14L1Q92503 715 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 CAVIN3Q969G5 261 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 RNPC3Q96LT9 517 aaKnown RBP9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 ZNF518BQ9C0D4 1074 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 FLRT1Q9NZU1 646 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
LINCMD1-201ENST00000418518 CCDC66A2RUB6 948 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 LACTBL1A8MY62 500 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 FAM155AB1AL88 458 aaPredicted RBP9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 RAD51CO43502 376 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 GPR32O75388 356 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 HEXIM1O94992 359 aaKnown RBP9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 GLI1P08151 1106 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 NFICP08651 508 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 PAEPP09466 180 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 SMIM10L2AP0DMW4 78 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 SMIM10L2BP0DMW5 78 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 COMTP21964 271 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 MAN1A1P33908 653 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 SLC1A1P43005 524 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 NSFP46459 744 aaKnown RBP9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 DNA2P51530 1060 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 GSCP56915 257 aaPredicted RBP9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 FAM193AP78312 1265 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 TFAMQ00059 246 aaKnown RBP9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 GABPB1Q06547 395 aaPredicted RBP9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 TRPC3Q13507 836 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 SLC10A6Q3KNW5 377 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 NAA35Q5VZE5 725 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 APBB1IPQ7Z5R6 666 aaPredicted RBP9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 TLK2Q86UE8 772 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 IFT20Q8IY31 132 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 TMEM192Q8IY95 271 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 MREGQ8N565 214 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 C1orf127Q8N9H9 656 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 ZNF668Q96K58 619 aaPredicted RBP9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 KRT12Q99456 494 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 CYP3A43Q9HB55 503 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 CISHQ9NSE2 258 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 LCMT1Q9UIC8 334 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms