RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 SLC30A5Q8TAD4 765 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 FAXDC2Q96IV6 333 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 APOL6Q9BWW8 343 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 NIF3L1Q9GZT8 377 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 CRISPLD2Q9H0B8 497 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 FAM105AQ9NUU6 356 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 DPP3Q9NY33 737 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 NENFQ9UMX5 172 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 PCDHB2Q9Y5E7 798 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 RCCD1A6NED2 376 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 DDX3XO00571 662 aaKnown RBP eCLIP22.3■■□□□ 1.16
CASC3-203ENST00000418132 CYP26A1O43174 497 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 ABL1P00519 1130 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 KRT19P08727 400 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 MAGEA1P43355 309 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 EPS8L1Q8TE68 723 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 ZNF333Q96JL9 665 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 TRAIPQ9BWF2 469 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 VRTNQ9H8Y1 702 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 CNTN6Q9UQ52 1028 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 ZSCAN20P17040 1043 aaPredicted RBP22.3■■□□□ 1.16
CASC3-203ENST00000418132 ATICP31939 592 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 ETF1P62495 437 aaKnown RBP22.3■■□□□ 1.16
CASC3-203ENST00000418132 DSC3Q14574 896 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 LNX1Q8TBB1 728 aaPredicted RBP22.3■■□□□ 1.16
CASC3-203ENST00000418132 CAGE1Q8TC20 777 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 TSC1Q92574 1164 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 LACRTQ9GZZ8 138 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 PARP2Q9UGN5 583 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 NAGPAQ9UK23 515 aa22.3■■□□□ 1.16
CASC3-203ENST00000418132 NOCTQ9UK39 431 aaKnown RBP22.3■■□□□ 1.16
CASC3-203ENST00000418132 SGPL1O95470 568 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 KCNE1P15382 129 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 C10orf76Q5T2E6 689 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 TMEM130Q8N3G9 435 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 UBR7Q8N806 425 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 AGPAT1Q99943 283 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 LUC7LQ9NQ29 371 aaKnown RBP22.29■■□□□ 1.16
CASC3-203ENST00000418132 TFR2Q9UP52 801 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 STAU1O95793 577 aaKnown RBP22.29■■□□□ 1.16
CASC3-203ENST00000418132 CD4P01730 458 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 POLR2BP30876 1174 aaKnown RBP22.29■■□□□ 1.16
CASC3-203ENST00000418132 GUCY2FP51841 1108 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 RBP5P82980 135 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 NAB2Q15742 525 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 ALKBH5Q6P6C2 394 aaKnown RBP22.29■■□□□ 1.16
CASC3-203ENST00000418132 SLC47A2Q86VL8 602 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 GLYCTKQ8IVS8 523 aa22.29■■□□□ 1.16
CASC3-203ENST00000418132 SMIM28A0A1B0GU29 152 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 PJA2O43164 708 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 KRT86O43790 486 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 CLSTN1O94985 981 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 KRT5P13647 590 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 MNX1P50219 401 aaPredicted RBP22.28■■□□□ 1.16
CASC3-203ENST00000418132 KIF5AQ12840 1032 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 MBTPS1Q14703 1052 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 CCDC122Q5T0U0 273 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 NOP9Q86U38 636 aaKnown RBP22.28■■□□□ 1.16
CASC3-203ENST00000418132 TXLNBQ8N3L3 684 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 BEST2Q8NFU1 509 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 SLC20A1Q8WUM9 679 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 ARMC5Q96C12 935 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 TSGA10Q9BZW7 698 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 KLK14Q9P0G3 267 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 TRIM10Q9UDY6 481 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 UBQLN1Q9UMX0 589 aaKnown RBP22.28■■□□□ 1.16
CASC3-203ENST00000418132 AGAP1Q9UPQ3 857 aa22.28■■□□□ 1.16
CASC3-203ENST00000418132 MGEA5O60502 916 aa22.27■■□□□ 1.16
CASC3-203ENST00000418132 CYP11B1P15538 503 aa22.27■■□□□ 1.16
CASC3-203ENST00000418132 TNFAIP3P21580 790 aa22.27■■□□□ 1.16
CASC3-203ENST00000418132 ASPAP45381 313 aa22.27■■□□□ 1.16
CASC3-203ENST00000418132 RBM10P98175 930 aaKnown RBP22.27■■□□□ 1.16
CASC3-203ENST00000418132 PKN2Q16513 984 aaKnown RBP22.27■■□□□ 1.16
CASC3-203ENST00000418132 ZNF667Q5HYK9 610 aa22.27■■□□□ 1.16
CASC3-203ENST00000418132 MRPL10Q7Z7H8 261 aaKnown RBP22.27■■□□□ 1.16
CASC3-203ENST00000418132 HACE1Q8IYU2 909 aa22.27■■□□□ 1.16
CASC3-203ENST00000418132 KIF18AQ8NI77 898 aa22.27■■□□□ 1.16
CASC3-203ENST00000418132 U2AF1L4Q8WU68 220 aaKnown RBP22.27■■□□□ 1.16
CASC3-203ENST00000418132 ACP6Q9NPH0 428 aa22.27■■□□□ 1.16
CASC3-203ENST00000418132 ZNF623O75123 536 aa22.27■■□□□ 1.15
CASC3-203ENST00000418132 PDE6CP51160 858 aa22.27■■□□□ 1.15
CASC3-203ENST00000418132 GLRA4Q5JXX5 417 aa22.27■■□□□ 1.15
CASC3-203ENST00000418132 BCO2Q9BYV7 579 aa22.27■■□□□ 1.15
CASC3-203ENST00000418132 IRX2Q9BZI1 471 aaPredicted RBP22.27■■□□□ 1.15
CASC3-203ENST00000418132 ATP8B3O60423 1300 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 KIF5CO60282 957 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 ITGA4P13612 1032 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 CHRNB2P17787 502 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 RAB27AP51159 221 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 BPIFB4P59827 614 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 WDR72Q3MJ13 1102 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 SYT10Q6XYQ8 523 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 DDX1Q92499 740 aaKnown RBP22.26■■□□□ 1.15
CASC3-203ENST00000418132 C18orf25Q96B23 403 aaPredicted RBP22.26■■□□□ 1.15
CASC3-203ENST00000418132 HPDLQ96IR7 371 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 MYO1AQ9UBC5 1043 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 TUBGCP4Q9UGJ1 667 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 GUCA1BQ9UMX6 200 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 PCDHB4Q9Y5E5 795 aa22.26■■□□□ 1.15
CASC3-203ENST00000418132 XPOTO43592 962 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms