RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 COL20A1Q9P218 1284 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.26□□□□□ -1.41
RFC4-204ENST00000417876 TBKBP1A7MCY6 615 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 PJA2O43164 708 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 CDC14BO60729 498 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 TSHRP16473 764 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 CLRN1P58418 232 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 NOMO3P69849 1222 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 CREMQ03060 361 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 PTH1RQ03431 593 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 KIF22Q14807 665 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 BMT2Q1RMZ1 405 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 FAM209BQ5JX69 171 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 C1orf228Q6PIY5 440 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 GPRIN1Q7Z2K8 1008 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 DPP9Q86TI2 863 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 FAM124AQ86V42 546 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 LIX1LQ8IVB5 337 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 OR10H5Q8NGA6 315 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 DEPTORQ8TB45 409 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 KIAA1191Q96A73 305 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 TMEM176AQ96HP8 235 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 GNRHR2Q96P88 292 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 LMF1Q96S06 567 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 PLA2G12BQ9BX93 195 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 DPH1Q9BZG8 443 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 GSTO2Q9H4Y5 243 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 OGDHLQ9ULD0 1010 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 MED16Q9Y2X0 877 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 ARAP1Q96P48 1450 aa6.25□□□□□ -1.41
RFC4-204ENST00000417876 SYNJ1O43426 1573 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 POM121BA6NF01 834 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 CCER2I3L3R5 266 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 TRIM13O60858 407 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 GJB1P08034 283 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 MTHFD1P11586 935 aaKnown RBP6.24□□□□□ -1.41
RFC4-204ENST00000417876 RPL17P18621 184 aaKnown RBP6.24□□□□□ -1.41
RFC4-204ENST00000417876 SLC6A2P23975 617 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 STT3AP46977 705 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 TRAPPC10P48553 1259 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 RAP2BP61225 183 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 HTRA4P83105 476 aaPredicted RBP6.24□□□□□ -1.41
RFC4-204ENST00000417876 CHAF1AQ13111 956 aaPredicted RBP6.24□□□□□ -1.41
RFC4-204ENST00000417876 DHX8Q14562 1220 aaKnown RBP6.24□□□□□ -1.41
RFC4-204ENST00000417876 UBXN2BQ14CS0 331 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 KLHDC7AQ5VTJ3 777 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 ARHGEF18Q6ZSZ5 1173 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 TAX1BP1Q86VP1 789 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 KBTBD7Q8WVZ9 684 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 ARL8AQ96BM9 186 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 FMNL2Q96PY5 1086 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 SEC61A2Q9H9S3 476 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 GPRC5BQ9NZH0 403 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 ZDHHC8Q9ULC8 765 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 AGAP1Q9UPQ3 857 aa6.24□□□□□ -1.41
RFC4-204ENST00000417876 RAPGEF2Q9Y4G8 1499 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 KLRG2A4D1S0 409 aaPredicted RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 BTN3A1O00481 513 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 DNAJB5O75953 348 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 PRSS23O95084 383 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 ABHD16AO95870 558 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 SNRPA1P09661 255 aaKnown RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 ABCB4P21439 1286 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 CFPP27918 469 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 IL6STP40189 918 aaPredicted RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 EPHB4P54760 987 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 STK3Q13188 491 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 DAG1Q14118 895 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 HIBCHQ6NVY1 386 aaPredicted RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 BORAQ6PGQ7 559 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 C1QL4Q86Z23 238 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 LGI4Q8N135 537 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 PCSK9Q8NBP7 692 aaKnown RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 RNF169Q8NCN4 708 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 GIMAP8Q8ND71 665 aaPredicted RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 MSLNLQ96KJ4 702 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 CPEB1Q9BZB8 566 aaKnown RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 UNKQ9C0B0 810 aaKnown RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 EPC1Q9H2F5 836 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 BRD9Q9H8M2 597 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 CNNM1Q9NRU3 951 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 SACM1LQ9NTJ5 587 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 GJB4Q9NTQ9 266 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 TRMT13Q9NUP7 481 aaKnown RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 MRPS18AQ9NVS2 196 aaKnown RBP6.23□□□□□ -1.41
RFC4-204ENST00000417876 FAM30AQ9NZY2 134 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 JKAMPQ9P055 326 aa6.23□□□□□ -1.41
RFC4-204ENST00000417876 B5MCH6 92 aa6.22□□□□□ -1.41
RFC4-204ENST00000417876 IL18RAPO95256 599 aa6.22□□□□□ -1.41
RFC4-204ENST00000417876 AMHP03971 560 aa6.22□□□□□ -1.41
RFC4-204ENST00000417876 PSMC1P62191 440 aaKnown RBP6.22□□□□□ -1.41
RFC4-204ENST00000417876 RPS16P62249 146 aaKnown RBP6.22□□□□□ -1.41
RFC4-204ENST00000417876 CTBP1Q13363 440 aa6.22□□□□□ -1.41
RFC4-204ENST00000417876 GRAMD1BQ3KR37 738 aa6.22□□□□□ -1.41
RFC4-204ENST00000417876 TUBB8Q3ZCM7 444 aa6.22□□□□□ -1.41
RFC4-204ENST00000417876 FKBP15Q5T1M5 1219 aa6.22□□□□□ -1.41
RFC4-204ENST00000417876 UTP14CQ5TAP6 766 aaKnown RBP6.22□□□□□ -1.41
RFC4-204ENST00000417876 IZUMO3Q5VZ72 239 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms