RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 STKLD1Q8NE28 680 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 SLC7A14Q8TBB6 771 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 SCFD1Q8WVM8 642 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 HVCN1Q96D96 273 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 UROC1Q96N76 676 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 ACCSQ96QU6 501 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 MTMR12Q9C0I1 747 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-206ENST00000417540 CRISPLD1Q9H336 500 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 RPF1Q9H9Y2 349 aaKnown RBP11.11□□□□□ -0.63
HDLBP-206ENST00000417540 SEL1LQ9UBV2 794 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 PRKAG3Q9UGI9 489 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 KCNH3Q9ULD8 1083 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 STYXL1Q9Y6J8 313 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 DENND4CQ5VZ89 1909 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 TICRRQ7Z2Z1 1910 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 NCANO14594 1321 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 PATJQ8NI35 1801 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 FSD2A1L4K1 749 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 DCXO43602 365 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 LRPAP1P30533 357 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 AARSP49588 968 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDLBP-206ENST00000417540 ARPP19P56211 112 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 ZBTB6Q15916 424 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 ARMCX5Q6P1M9 558 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 LILRA6Q6PI73 481 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 UNC13DQ70J99 1090 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 GPR149Q86SP6 731 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 CCDC65Q8IXS2 484 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 TDRD5Q8NAT2 981 aaKnown RBP11.1□□□□□ -0.63
HDLBP-206ENST00000417540 KREMEN2Q8NCW0 462 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 OR10T2Q8NGX3 314 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 ERCC4Q92889 916 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-206ENST00000417540 ELMO3Q96BJ8 720 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 SUSD3Q96L08 255 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 MYADMQ96S97 322 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 SLC39A2Q9NP94 309 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 SLC38A7Q9NVC3 462 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 FAM13BQ9NYF5 915 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 RBAKQ9NYW8 714 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-206ENST00000417540 FNIP2Q9P278 1114 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 UBQLN1Q9UMX0 589 aaKnown RBP11.1□□□□□ -0.63
HDLBP-206ENST00000417540 FAM50BQ9Y247 325 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 HCN4Q9Y3Q4 1203 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-206ENST00000417540 NUB1Q9Y5A7 615 aa11.1□□□□□ -0.63
HDLBP-206ENST00000417540 HELZP42694 1942 aaKnown RBP11.09□□□□□ -0.63
HDLBP-206ENST00000417540 GREB1Q4ZG55 1949 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 MUC6Q6W4X9 2439 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 CCDC195A0A1B0GUA6 201 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 CARNS1A5YM72 827 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 CLIC2O15247 247 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 TGFB1I1O43294 461 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 TBC1D4O60343 1298 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 GPR37L1O60883 481 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 SOAT2O75908 522 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 SEC24AO95486 1093 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 PDGFBP01127 241 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-206ENST00000417540 HOXB8P17481 243 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-206ENST00000417540 POLR2BP30876 1174 aaKnown RBP11.09□□□□□ -0.63
HDLBP-206ENST00000417540 OR1D2P34982 312 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 CYP2J2P51589 502 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 SLC5A9Q2M3M2 681 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 SPATA1Q5VX52 437 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 C9orf57Q5W0N0 161 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 DCLRE1AQ6PJP8 1040 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 CCDC149Q6ZUS6 474 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 PPFIBP1Q86W92 1011 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 C1orf127Q8N9H9 656 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 IQUBQ8NA54 791 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 OR5B17Q8NGF7 314 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 CXorf38Q8TB03 319 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 PLEKHO2Q8TD55 490 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 RSAD2Q8WXG1 361 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 ING5Q8WYH8 240 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 SMG7Q92540 1137 aaKnown RBP11.09□□□□□ -0.63
HDLBP-206ENST00000417540 PAGE5Q96GU1 130 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 PGLYRP2Q96PD5 576 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 POP1Q99575 1024 aaKnown RBP11.09□□□□□ -0.63
HDLBP-206ENST00000417540 C7orf25Q9BPX7 421 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 RTP3Q9BQQ7 232 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 CUEDC2Q9H467 287 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.09□□□□□ -0.63
HDLBP-206ENST00000417540 AGPAT3Q9NRZ7 376 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 FBXL5Q9UKA1 691 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
HDLBP-206ENST00000417540 PI4K2BG5E9Z4 385 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 NARSO43776 548 aaKnown RBP11.08□□□□□ -0.64
HDLBP-206ENST00000417540 ZMYND10O75800 440 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 ITGB3P05106 788 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 MTHFRP42898 656 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 CASP4P49662 377 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 ITIH3Q06033 890 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 ELAVL2Q12926 359 aaKnown RBP11.08□□□□□ -0.64
HDLBP-206ENST00000417540 STK4Q13043 487 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 KMT5BQ4FZB7 885 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 ZNF280DQ6N043 979 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 CES5AQ6NT32 575 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms